Bicyclus anynana (squinting bush brown): 112043807
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Entry
112043807 CDS
T07476
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112043807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112043807
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112043807
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112043807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
112043807
NCBI-ProteinID:
XP_023935171
UniProt:
A0A6J1MXB1
LinkDB
All DBs
Position
Z:complement(3600821..3633988)
Genome browser
AA seq
2395 aa
AA seq
DB search
MNLDPLTFSLSQINYLVANLNKKNFKQVNQELTQIISLYGLEAENQVLRSLLTEAVKTSW
DNDRPGPVNSIHATLLTQYLSCLLNHPAKSTVVCSIIDNPSKSVQKALKPTNTLLSRIAR
LLKFTTAQDVAFSLVLRKTSPKPEITSFAKQHLKKRFLDFVQCYLDAERGHQVERAGLQE
CSPEVLQTLLTSLAFENFRLAAVTKDLFLKKLRVDFPREVVPIVLAPLLYPDDTSTPLEE
MTTSDDMAAAMMDNSLGEIIREIGYSFTTSVEDCKNNMINFGAREPTAIDIARIISMMVR
FHATLQEGPLIQTPGNFWMNHETKKEPVPHGHPETWNAEVFVQTLKELASNLNWKEVILQ
LDHPEFVVPDRQGLSLLFTILRLGLQSAGYPANIFPVEYLCRRWTNLEGQMSLLTNILKY
PDIFSFADHPFHPVSIDLLKSAPEIDNKEISTWRCLYLVELLLYASERGYYMQVHELFKF
PLQNCPDILLLALLQISPPITVFRQELLTTLIPIFLGNHPNSGIILQHAWHTQNPNIKPI
IMHAMADWYIRGDCDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLKLD
KWLTDKIRDHGETFVSAMVKFLQRRCPPMLGKAPEEQLPKAAQLPPETIGTMLTCLQLCI
PNVLQELQEAIYNVIASCQTLIMTKTRPTIAGIARPHTRVLETPFNPALGVGGQLFTPHV
DAIASLAPNVANLTLGAPANTAFAMPGTLGPLVAAPGSPSRLLGAGPNSPFAIMPMPQHP
TVANMTALARMPPMPAMDKPRLPEPIHFPDIMHSVSKEIEDEANGYFQRIYNHPPHPTLS
IDEVLDMLKKFQDSPKTREREVFSCMLRNLFEEYRFFPQYPDKELHITAQLFGGIIEKGL
VPSYVSLGLALRFVLDALRKPEGSKMYYFGVAALDRFKSRLKDYHKYCEHVRAIPHFNEF
PPHLIEYIEYGLQSQEPPTKPQGAVLPASLAAMLNQTPVVTVSAPYRNVVCAPNPISVIS
KIANCAGGIGSRPSIANATNIDTLLTATDIDDKIVAPPEAIQDKTAFIFNNLSQLNLPTK
CEELKEVLTEEYHNWLSQYLVMKRASIELNFHALYSNFLDVLKIREINKMVTKETFRNIR
VLLRSDKGIANFSDRSLLKNLGHWLGMLTLARSQPILYLDLDLKALLLEAYHKGQQELLY
VVPFIAKILESCSKSIVFKPPNPWTMSLMNVLAELHQEPDLKLNLKFEIEVLCKNLSLDI
TDLKPSLYLKDPEKLRTIEFQLSQPKPPKETATTVLPVHQAIIAPQQLQMMPPPPPMIPV
EDLVGTAPTPTLVPGDPGLMGVLGLPEPRFNYLDVNVSSTSAFGHKIIFNPHIILFQNYP
HLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFAFDPDETRMRTCAHHMMRN
LTAGMAMITCREQILSTISTNLKAAFITALIPTAPQQLNTLQKDIIESAAAVLATENMEL
ACAFIQKTAVEKALPELDKRLMNDYEMRKIARQEARRYYDPMVLTYQTERIPERVRLRVS
GPTDMQITVYEEFACNIPGFMPVRDAGMFIPKPTQEQIPQMTFAPAVNQTQVYGHDEMTT
LMSAAELFLSTAVQFPVFAVQATNMHKLFDSLAMARRNRDIVSGFTLLQRAVEGLLDGHI
VPAGGSPEHVELMTRYRDIHLRVLKLLEDSRVYGHAWTTKQITYCVTECRDELKYNLEAI
DCLVRNHLINLPQYDIALAQLMDNGNNYVAVSFAMQLVQLYLVDDRNDIYATESDLYHCT
DTLVRLTSQTRPPPEGLATLIETIRINQDPSSFLGERSPLGPTSHIHNGILQVRSREYDD
PHGLQEKTENLLREWRNILLGQLTEIELAQNFNIYVHRMNMNGILKSDDMITRFFRIATQ
MCIENVYQLLNEDRMNPPPVPPKREKYYTMCDSFIKLVSLLIKNTADNGNPTPKLNLLNK
ILGIIAGCLLQDQEEHGVNFQQLPYHRLLQILFLDMNMAEPVLESMNYQILTAFCHTLRI
IRPSVAPSFCYAWLEIVAHRSFINRVLAVTPQQKSIMEVLGWGMYSTLLIDLFKFLDPFL
RNTELAQPVMMLYKGSLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFPRN
MRLPDPFTPNLKVDLLAEISLAPRAVINYSTIIPSSQFKKDLDAYIKARAPVTFLSELRS
NMQVLNEPGRRYNSQLINAVVLYVGTQAIAHIRAKGQTPNMTTIAHSAHMDIFQNFTVDF
DYEGRYLFLNAIANQLRYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLLERLIVNRPH
PWGLLITFIELIKNPIYKFWTHEFVHCAPEIEKLFASVARSCIAEKGGAERELTE
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggaccctttaacgtttagcttatcacaaatcaattatctcgttgctaatcta
aacaaaaagaactttaagcaggtcaatcaggagttgactcagattatcagtctctatggc
ttggaggcagagaatcaagtattgaggagcctgcttactgaggcagtaaagacttcgtgg
gataacgatcgtcctgggcctgttaatagtatacacgcaaccctcttaacgcaatacctg
tcctgtctactcaaccatccggctaagtctactgttgtctgcagtattatagacaaccca
tccaagtctgtgcaaaaggccttaaaacccaccaacacattacttagtcgaattgcaaga
ttgctgaagttcactacagcacaggatgttgccttctcgttagttctgagaaaaacctcg
ccaaagcctgaaataacatcctttgctaaacaacatctcaagaagcgttttttggacttt
gtacagtgttaccttgatgcagaacgtgggcatcaagtggagcgtgcaggtctgcaggag
tgcagtcctgaggtattacaaactctattaacgagtctcgcgttcgagaactttcggtta
gcggccgttaccaaggatttgtttctaaaaaaattgcgagtagactttccgcgcgaagta
gtgcccattgtgctcgctccgctcttgtatcctgacgatacaagcacaccactcgaggaa
atgacgacgtccgatgacatggcggctgccatgatggacaattctctcggagaaatcatc
cgagagattggatactcctttacaacatctgtagaggactgcaaaaataacatgataaac
tttggggcgcgagagccgacagccatcgatatcgctcgaataatatcgatgatggtgagg
tttcatgccactctgcaagagggtcctctgattcaaacaccagggaatttttggatgaat
cacgaaactaagaaagagcctgttccacatggccatccagagacatggaatgctgaggtg
tttgtgcaaacattaaaagaactggcctctaatcttaattggaaggaagttattcttcag
cttgatcacccagagtttgtagtaccggacagacaagggctaagcttgctcttcacgatt
ttgcgcttgggtctccagagcgccggctaccctgccaatatattcccagtagaatatctg
tgccgacgatggacaaacttagaaggccaaatgagtctactaacaaacatactcaaatat
ccagatatattcagttttgctgaccatccatttcatccagtgtcgattgaccttttgaaa
tctgctcctgaaatagataacaaagaaatatccacatggagatgcctctatttggtagaa
cttttactgtatgcgtcagagagaggatattacatgcaagtccatgaactcttcaagttc
ccattacaaaactgcccagacatattgttattggcattactgcaaatcagtccacccatt
acagtatttagacaagagttgctgacaacactaattcccatatttcttggcaatcatccc
aactctggaataattttacagcatgcttggcatacgcaaaatcccaacatcaaacctatt
ataatgcatgcgatggcagattggtacatacgcggggattgtgatcaatccaagttgtcc
agaattttagacgtcgcgcaggatttaaaggcgctgtcgttattgctaaatgttcaatcg
ttcccattcgtaatagatttggcctgtctagcatcaaggcgagagtatctcaaactcgac
aaatggctcactgacaaaatcagagaccatggagaaacctttgtttcggctatggtgaag
tttctgcaacgccgatgtcctccaatgcttggaaaagctccagaggagcagctgcccaag
gctgcgcagttgccaccagaaactatcggaaccatgttaacctgcttacaactctgcata
cccaatgtgttacaagagttacaagaggcaatatataatgtaatagcaagttgccaaaca
ttgataatgaccaagacgagaccaactattgctggaattgcgcgtccgcatacaagagtg
ttggagactcctttcaatcctgcactgggagtaggggggcaactgtttacacctcatgtg
gatgctattgcaagcttggcgcctaacgttgccaatttaacgctaggtgcacctgcgaac
actgcgtttgccatgcctggaaccttaggaccattggttgctgcacctgggtctccctcg
cgacttctcggtgccgggccgaatagccccttcgccataatgccgatgccgcaacacccc
actgttgcaaatatgacagctctagcaagaatgcctccaatgccagcaatggacaaacca
cgcctgccagagccgatacatttcccagatataatgcacagtgtttcaaaagaaatcgaa
gacgaagctaatggttactttcaacgaatttacaatcatcccccacatccaactctgtct
atagatgaagtgttagacatgctaaagaagttccaagattcgcccaagacccgagaacga
gaagttttctcgtgcatgctacgaaacctgtttgaggagtacagattcttccctcaatat
cccgataaggaactccatatcaccgcacagttgtttggtgggataatagagaaaggttta
gttcccagctatgtgtctttagggctggccttgagatttgtgttggatgctctccgcaaa
cctgaaggatctaaaatgtactattttggtgtagccgctctggatagattcaagtcacgt
ctgaaggactatcacaaatactgcgagcatgttagggccattccacacttcaatgagttc
ccgccacatcttatagaatacattgagtatggtcttcagagtcaggaaccacccacaaag
ccacagggtgcagtcctgcctgcaagtcttgccgccatgttaaaccagacaccagtggta
acagtttcagcaccttataggaatgtggtttgcgcaccaaatcccatctcggtcatttca
aagatcgcaaactgtgccgggggcataggcagccggccctccattgctaatgccacgaac
atcgatacacttctcactgctactgatatagatgacaaaattgtggctccacctgaagca
atccaagacaagacggcctttattttcaataatctcagtcaattgaatctgccaaccaaa
tgtgaagaattaaaggaagtattaacagaagaataccacaattggttatcgcagtatctg
gtgatgaaaagggcctcaatagagctcaatttccatgcactctattccaacttcctcgac
gttcttaaaatccgcgaaataaataaaatggttacaaaagagacatttcgcaatatcagg
gtattactgcgttctgacaaaggcatagctaacttctctgaccgatctttgttgaaaaac
cttggtcattggttaggcatgctcacattagcccgcagtcagcccattctttacctagat
ctcgacctcaaagcacttttactcgaagcttatcacaaaggccagcaggagctactctac
gtggtgccgtttattgcgaagatcttggagtcttgctccaagagcatcgtatttaaaccc
ccaaatccatggacaatgtccctgatgaacgtgttagctgaattacatcaagagcccgat
ctaaaactaaacttaaagtttgagatagaagtgctttgtaaaaacttgagcttagatata
actgatttgaaaccatctctatatttaaaagaccccgaaaagttaagaacgatcgagttt
caactttcacaacccaaaccccccaaagagactgcgacgaccgtactaccggttcatcag
gctataatagcgccccagcagctacaaatgatgccacctcctccgccaatgatccccgtc
gaggacttggtggggacggcaccgacgccgacgctcgtacccggcgacccgggcctgatg
ggcgtgctgggcctacccgagccccggttcaactacctcgacgtgaacgtctcttccacc
tccgccttcgggcacaagatcatattcaacccgcacatcatcctgttccaaaactatcca
cacttgaaacagttcgtgaagcccgctatcgagagatccatacaagagtggatacacccg
gtcgtggacaggtcgatcaagtacgcactgacgacgtgcgagcaaatcatacggaaggac
ttcgcgttcgaccccgacgagacgcggatgcgcacctgcgcgcatcacatgatgcgaaat
ctgactgctggcatggccatgatcacgtgccgcgagcagatcctcagcacgatcagtaca
aacttgaaggctgcgttcataactgctttgataccgaccgctccccaacagctgaacaca
ttgcagaaagacatcatagagagcgccgctgcggttctagcgacggaaaacatggagctc
gcatgcgcatttatacagaagacggctgtggagaaggcactaccagagctcgataagagg
ctgatgaacgattatgaaatgaggaaaattgccagacaggaagcccgaagatactacgac
cctatggtacttacttaccaaactgaaaggataccggagcgagtgaggctgcgcgtcagc
ggcccgaccgatatgcagataaccgtgtatgaggagttcgcctgtaacatcccaggtttc
atgccagtgcgcgatgccggcatgttcatccctaaacctactcaggagcaaattcctcag
atgacttttgcgccagctgtgaatcagactcaggtgtatggacacgatgagatgactaca
cttatgtccgccgcagagttgttcctgtcaactgccgtgcagtttcccgtgttcgcagta
caagctacaaacatgcacaaactgtttgattccctcgcaatggccagacgaaaccgtgac
atcgtgtctggctttacactcctacagagggctgtggagggcctcttggacggtcacatt
gtcccggccggaggcagccctgaacatgtagaactgatgactcgttaccgagacatccac
cttcgagtcctcaaattgttagaagacagcagggtgtatggccacgcatggactactaaa
cagatcacttactgtgtgaccgaatgcagggatgagcttaagtacaatttggaagctatt
gattgccttgtcaggaatcatttgattaacttgccacagtatgatatcgcgcttgcacag
ttgatggacaacgggaataattatgtggctgtttcatttgcgatgcaactcgttcaactt
taccttgtggacgatcgcaatgatatatatgccacagagtccgacctgtaccattgcact
gatactctggtcaggctgacctcacagacgaggcctccgcccgagggcctagcaactctg
atcgagacaatccggatcaatcaggacccaagcagcttcttgggggaaaggtctccattg
gggccaacctctcacatccataatggcattttacaagtacgatcccgcgaatacgacgac
ccgcacggtctccaagagaaaactgagaacctcctccgcgaatggaggaacatccttctc
ggccagctcacagagatcgagctcgcgcagaacttcaacatatacgtccacaggatgaat
atgaacggcatcctcaagtcggatgacatgatcacacggttcttccgcatcgccacacag
atgtgcatcgagaatgtgtaccagctcctcaacgaggaccgcatgaatcccccccctgtg
ccccccaagagggagaagtactacaccatgtgcgattcattcatcaaacttgtgtccttg
ctcataaagaatacagccgacaatggcaacccgacgccgaagcttaacttgttgaataag
atactgggtatcatagcaggttgtttgcttcaagatcaagaagagcatggagttaatttc
caacaacttccataccatcgtctgcttcaaatattgttccttgatatgaatatggcagag
ccagtcctggagtctatgaattaccagattttgactgctttctgccacacgctacgtatc
ataagacctagcgtcgcacccagtttctgctacgcgtggctcgagatagtggcgcataga
tcctttataaacagggttcttgctgtaacgccgcaacaaaagtctatcatggaagtattg
ggatggggtatgtattcgacgctcctgatcgacctgttcaagttcctcgacccgttccta
cgtaacacggagctggcccagccggtcatgatgctgtacaagggcagtctcaaggtgctg
ttggtgcttctgcacgacttccccgaattcctgtgcgactaccactacggtttctgcgat
gagataccgccaaactgcatacagatgaggaatctcatcctgtctgccttcccgaggaac
atgaggctgcccgatccgttcacgccgaatctgaaagtggatctactggctgagataagc
ctggcgcctcgagccgtcatcaactactcgacgatcataccctcgtcccagtttaagaag
gatctggacgcgtacataaaggctcgcgcgccggtcactttcctgtcagagctacgtagc
aacatgcaggtgctcaacgaaccaggccgcagatacaacagccagctgataaacgctgtg
gtcctgtacgtggggactcaggccatcgcccacatcagggccaaggggcagacaccgaac
atgacgaccatagctcactcagcacacatggacattttccaaaacttcaccgtagacttt
gactacgaaggacggtatttgttcctgaatgcgattgcaaaccaattgcgttacccgaac
agccacacgcactacttcagctgttgcctgctgtatctgtttgcggaggcgaactcggag
gctgttcaggagcagatcaccaggatgctgctcgagcgactgatcgtgaaccgaccccac
ccgtggggactccttatcacgttcatcgaactcatcaaaaatcccatctacaaattttgg
actcacgaatttgtacactgcgccccggagatcgaaaaattgttcgcatcggtcgcgcga
tcctgcattgcagagaagggtggggctgaacgtgagttgaccgagtag
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