KEGG   Bicyclus anynana (squinting bush brown): 112044011
Entry
112044011         CDS       T07476                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bany  Bicyclus anynana (squinting bush brown)
Pathway
bany03013  Nucleocytoplasmic transport
bany03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bany00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112044011
  09122 Translation
   03013 Nucleocytoplasmic transport
    112044011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bany03019]
    112044011
   03041 Spliceosome [BR:bany03041]
    112044011
Messenger RNA biogenesis [BR:bany03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     112044011
Spliceosome [BR:bany03041]
 Complex C
  Other components
   EJC/TREX
    112044011
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112044011
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd eIF2A WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_HPS5 WD40_MABP1-WDR62_1st RMC1_N WDR90_beta-prop_4th Tricorn_2nd WD40_RFWD3 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_ELP1_1st Beta-prop_WDR11_1st Beta-prop_NUP159_NUP214 Beta-prop_NOL10_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 112044011
NCBI-ProteinID: XP_023935497
UniProt: A0A6J1MRJ8
LinkDB
Position
24:complement(1892054..1902839)
AA seq 328 aa
MKDSKSAQTKIEDLNELRSYFSSHNVVREYISHSSKVHSVGWSCDGRRLASGSFDKSVAI
FNLERSRLVQDFVFRGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSRKCAATITTK
GENINIAWSPSGATIAVGNKEDLVSFIDARNFKVVTEEQFNFEVNEISWNNTSDLFFLTN
GLGCVHILSYPTLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNELACLRV
FSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVSAATFTVAWHPARYL
LAFACEDKEPPERKRDAGNLKLWGLSNN
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaaggattccaaatcagctcaaaccaaaatagaggatctgaacgagttgcgtagctat
ttctcaagtcacaacgtagtgcgggaatacatttcacacagttcaaaagttcattcagtg
ggctggtcgtgcgatggccggcgacttgcttcgggatctttcgacaaaagcgttgctata
ttcaacttggagaggagtagattggtacaagattttgtattccgaggtcacactgggtct
gtggatcagctgtgttggcacgcttctcacccagacctcttgagcacggccagtggagat
aaatctgtgcggatatgggataccagatctcggaaatgtgcggccacgatcacaacgaag
ggcgagaacataaacatcgcgtggtcgcccagcggcgccaccatcgccgtgggcaacaaa
gaggacctggtctcattcattgacgcgcgcaattttaaagttgtgacagaggagcagttc
aatttcgaagtgaacgagatctcgtggaacaacacctcggacctgttcttcttgacaaat
gggctgggatgtgtgcacatactttcttatccaacgttggagctgcagacggtactgaaa
gcgcaccccggcacctgcatatgtatcgagcacgaccccacgggccgttacttcgccacg
gggtcggcggacgcgctcgtgtcgctgtgggacgtcaacgagttggcttgtctgagggta
ttctcaaggttggagtggcccgttcgcacgttgtccttcagtttcgacggtcgcctgctg
gcgtcggccagcgaggaccacatcatcgatataggggacacagagacaggcgagaaggtg
gcagagattccggtatcagcggcgactttcacggtggcgtggcacccggcgcggtacctg
ctggccttcgcgtgcgaggacaaggagccgcccgaacgcaagcgggatgccggcaacctc
aagctgtggggcctcagcaacaactag

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