Bicyclus anynana (squinting bush brown): 112044011
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Entry
112044011 CDS
T07476
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03013
Nucleocytoplasmic transport
bany03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112044011
09122 Translation
03013 Nucleocytoplasmic transport
112044011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112044011
03041 Spliceosome [BR:
bany03041
]
112044011
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112044011
Spliceosome [BR:
bany03041
]
Complex C
Other components
EJC/TREX
112044011
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112044011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
RMC1_N
WDR90_beta-prop_4th
Tricorn_2nd
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_ELP1_1st
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Beta-prop_NOL10_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
112044011
NCBI-ProteinID:
XP_023935497
UniProt:
A0A6J1MRJ8
LinkDB
All DBs
Position
24:complement(1892054..1902839)
Genome browser
AA seq
328 aa
AA seq
DB search
MKDSKSAQTKIEDLNELRSYFSSHNVVREYISHSSKVHSVGWSCDGRRLASGSFDKSVAI
FNLERSRLVQDFVFRGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSRKCAATITTK
GENINIAWSPSGATIAVGNKEDLVSFIDARNFKVVTEEQFNFEVNEISWNNTSDLFFLTN
GLGCVHILSYPTLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNELACLRV
FSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVSAATFTVAWHPARYL
LAFACEDKEPPERKRDAGNLKLWGLSNN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattccaaatcagctcaaaccaaaatagaggatctgaacgagttgcgtagctat
ttctcaagtcacaacgtagtgcgggaatacatttcacacagttcaaaagttcattcagtg
ggctggtcgtgcgatggccggcgacttgcttcgggatctttcgacaaaagcgttgctata
ttcaacttggagaggagtagattggtacaagattttgtattccgaggtcacactgggtct
gtggatcagctgtgttggcacgcttctcacccagacctcttgagcacggccagtggagat
aaatctgtgcggatatgggataccagatctcggaaatgtgcggccacgatcacaacgaag
ggcgagaacataaacatcgcgtggtcgcccagcggcgccaccatcgccgtgggcaacaaa
gaggacctggtctcattcattgacgcgcgcaattttaaagttgtgacagaggagcagttc
aatttcgaagtgaacgagatctcgtggaacaacacctcggacctgttcttcttgacaaat
gggctgggatgtgtgcacatactttcttatccaacgttggagctgcagacggtactgaaa
gcgcaccccggcacctgcatatgtatcgagcacgaccccacgggccgttacttcgccacg
gggtcggcggacgcgctcgtgtcgctgtgggacgtcaacgagttggcttgtctgagggta
ttctcaaggttggagtggcccgttcgcacgttgtccttcagtttcgacggtcgcctgctg
gcgtcggccagcgaggaccacatcatcgatataggggacacagagacaggcgagaaggtg
gcagagattccggtatcagcggcgactttcacggtggcgtggcacccggcgcggtacctg
ctggccttcgcgtgcgaggacaaggagccgcccgaacgcaagcgggatgccggcaacctc
aagctgtggggcctcagcaacaactag
DBGET
integrated database retrieval system