KEGG   Bicyclus anynana (squinting bush brown): 112044086
Entry
112044086         CDS       T07476                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
bany  Bicyclus anynana (squinting bush brown)
Pathway
bany03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bany00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112044086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bany03041]
    112044086
Spliceosome [BR:bany03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    112044086
 Complex C
   U5 SnRNP specific factors
    112044086
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_Vps41 KNTC1_N Beta-prop_Nup120_160 Cytochrom_D1
Other DBs
NCBI-GeneID: 112044086
NCBI-ProteinID: XP_023935591
UniProt: A0A6J1MYF4
LinkDB
Position
19:complement(14858396..14862699)
AA seq 349 aa
MPEMEIKRRGEEYSVVPAKKTRHEVSVIGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEI
FTAKFHPEGKHLASAGFDRQIFLWNVYGQCDNVMVMKGHTGAVMELCFSPDGAHMYTGAT
DNTVAVWDVPTGQRIKKLKGHANFVNSVNGARRGPELIVSASDDNTIKLWDARKRNPIAS
FDSGYPVTSVLFNDTAEKIISGGIDNVIKVWDIRNNQISYKIKGHTDTITGMSLSYDGSY
LLSNSMDNTLRIWDVRPFAPSERCVKLMSGHQHNFEKNLLRCAWSPDGSKVAAGSSDRFL
YVWDTTSRRVLYKLPGHHGAVTDVHFHRSEPVLLSASSDKTVYLGEIDN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgcccgaaatggagattaaaagaagaggagaagaatattcagtagtaccagcaaagaaa
acccgccatgaagtatcagttattggaacaagagaaaaagctgtggtaacctcatccgta
cctagaacatcaaatctctacgctccaatcatgttgttggagggccatcagggtgagata
ttcacagccaagtttcatcctgaaggcaaacatttagcatcagcaggctttgacaggcaa
atatttttatggaatgtgtacgggcaatgtgacaatgtcatggtgatgaagggacacacg
ggcgcagtcatggagctgtgcttctcccccgacggcgcacacatgtacacgggcgcgacg
gataacacagtggccgtgtgggacgttcccaccggccagaggatcaagaaactcaaaggg
catgctaactttgtcaactctgtcaatggagcgagacgaggcccagagttaatagtatca
gcttcagatgacaataccataaaactatgggatgctaggaagaggaaccccatagcatca
tttgacagtggctacccggtcacatcagtattgtttaatgacacagcagagaaaataatt
tccggtggcatagacaatgtaatcaaagtgtgggacattaggaataatcaaatatcttat
aagattaaaggacatacagacactataactggcatgtccctctcatacgacggttcatac
ttgctgtccaactccatggacaacacgctgcggatctgggacgtgcggcccttcgcgccg
tccgagcgctgcgtcaagctcatgtcgggacaccagcacaactttgagaagaacctgttg
cgatgtgcttggtcccccgatggctccaaggtggcggcgggctcgtcggaccgcttcctg
tacgtgtgggacacgacgtcgcggcgcgtgctgtacaagctgccgggccaccacggcgcc
gtcaccgacgtgcacttccaccgcagcgagcccgtgctgctgtccgcctccagcgacaag
accgtctacctgggcgagatcgacaattaa

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