Bicyclus anynana (squinting bush brown): 112044540
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Entry
112044540 CDS
T07476
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03022
Basal transcription factors
bany03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112044540
09124 Replication and repair
03420 Nucleotide excision repair
112044540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bany03021
]
112044540
03400 DNA repair and recombination proteins [BR:
bany03400
]
112044540
Transcription machinery [BR:
bany03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112044540
DNA repair and recombination proteins [BR:
bany03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112044540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
112044540
NCBI-ProteinID:
XP_023936190
UniProt:
A0A6J1MKY9
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Position
22:2916637..2935038
Genome browser
AA seq
571 aa
AA seq
DB search
MTTSSEDVLLSVGHVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFQFVNPGGPDAQAKDRDQVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKNYTESTSMKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHVDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDQAIASAMRHTTLDLTVDLPQFTEPVPLLPDEDTVEKEKDGTSIHRSMI
KRFNQHSIMVLKASHKPNTSTNSNSSSKTTNNNNKVVENGMKEINGVEKRTAQEKDPTEP
VEKKKRILEKIHYEDLDSANVGESAQELKLSKVERYLLGPSSQVSQSSASTSNPPPLSAL
ASICQAWSSGQQCQRPLRVSASAAVGALGELSPGGALMRQHHASCMAQLIPPDVKSELHR
IYLSGGELLRELWRCFPQPGAAADADDAPARAEKFYEALLRFRNVKLRPFEEKMLRELTP
LASSLTKHMNQMIDAACTKYSLWQQRQAKLR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcgtcggaggacgttcttttgagcgtagggcacgtgcggtataagaaaggt
gatgggactttgtatgtgatgaaccaaagactggcatggatgttggagaaccgggataca
gttgctgtctcacacaagtacgctgatattaaaacacaaaaaatttcaccagcagggaaa
cctaaagtgcagttacaagtagtattacacgatgggacgtgttccacattccagtttgtc
aacccggggggcccggacgctcaggcgaaggacagggaccaagttaaaatgttattgcag
aacttactgccgaagtttaagaggcagatcgatggagaattagaaatgaaatctagatta
ctttccttacatcctactcttaagcatttatatgaagacttggtgatatcaaaagttatc
aatagtgaggaatattggaatactcccacgttgaagaactataccgagtctactagtatg
aaacaagaagccggtgtttccggagcatttctagcagatatccagccccagacagatggc
tgcaatggactaaagtacaatctgacacaggatataatcgacgcgatattcaaaacatac
ccagcagtgaggaagaaacacgtagactatgtgcccaataagatgaccgaggcagagttt
tggaccaagttctttcagtcgcattactttcacagagaccgtatagcatcgtcgtcgagc
aaggacctattcggcgagtgcgcaaaactagacgaccaagcgatcgcatcggccatgaga
cataccacgctggatctcactgtggatctaccccaattcacggagcctgtcccgctctta
cctgacgaggatacagtggagaaggaaaaggacggcacatcgatacaccgcagcatgatc
aaacggttcaaccaacactctattatggtgctcaaagctagtcataaaccaaacacaagc
accaatagcaatagcagtagcaaaacaacgaataacaataacaaagtggtcgagaatgga
atgaaagagatcaacggagtggagaagagaacagcacaagagaaggaccccaccgagccg
gtagagaagaagaagagaatattagagaagatacattacgaagatctggatagtgccaac
gttggtgagagtgcgcaagagttgaaattatcaaaagtagaaagatatttattaggcccg
tcatcacaagtcagccagtccagtgcgagcactagtaacccaccgccgttgtctgcctta
gcgtctatatgtcaagcgtggtcaagtggtcaacagtgtcagaggccgctgagagtgagt
gcgtcggcggcggtgggcgcgctgggggagctgagtcccgggggcgcgctcatgaggcaa
caccacgcttcgtgtatggcacaactaataccgccggacgtgaagagcgagctccaccgc
atctacctgtcgggcggcgagttgctccgcgagctgtggcgctgcttcccgcagcccggc
gccgccgccgacgccgatgacgcgcccgcgcgggctgagaagttctacgaggcgctgctg
aggttcaggaacgtcaagttgaggcctttcgaggaaaagatgcttcgcgaactgacccca
ctagcgtcgtcgttaactaaacacatgaaccaaatgattgacgccgcgtgtacaaagtac
tcactttggcaacagaggcaggcaaagttgaggtag
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