Bicyclus anynana (squinting bush brown): 112045638
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Entry
112045638 CDS
T07476
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112045638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bany03021
]
112045638
03019 Messenger RNA biogenesis [BR:
bany03019
]
112045638
Transcription machinery [BR:
bany03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112045638
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112045638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCHC_2
Nab2-like_zf-CCCH_
CpXC
Motif
Other DBs
NCBI-GeneID:
112045638
NCBI-ProteinID:
XP_023937675
UniProt:
A0A6J1MPZ6
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All DBs
Position
15:complement(15745161..15749574)
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AA seq
288 aa
AA seq
DB search
MEVLVANVDHMKFDIDYALEQQYGALPLPFPGMDKSTAAVCEFFSQPGGCNNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLSGFCPDGSSCKYMHPRFELPAPPEQTK
DAKRLPVCHYCGDVGHKASSCHKLPLEQREAAQKQEEARYRALGYIKPANDGEEPRIHPR
LLHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSNQQGNQNNHPFKKPN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgttggttgccaacgttgatcatatgaaattcgatatagattacgctttagaa
caacagtatggagccctaccgctaccctttcccgggatggacaaatctacagcggctgtg
tgtgaattcttcagtcaacctggtggatgtaataatgggccccagtgcccatatcggcac
gtgaggggagaccgaacagtcgtctgcaagcattggctgcgtggactctgcaagaaaggg
gaccagtgtgaatttctccatgagtatgacatgtcaaagatgccagagtgctatttctac
gctagatttaacgcttgtcataataaagagtgcccatttcttcatattgaccctgaaagt
aaaattaaggattgtccatggtatgacagaggcttctgcagacacggcccacactgtaga
cacaggcatgtaagaagagtgctgtgcatgaattatctgtcaggattctgtcccgatgga
tccagctgcaaatacatgcatccaaggtttgaactgcctgcaccaccagaacagaccaag
gatgccaaacgtttacctgtttgtcattactgtggtgatgtgggacataaagcatcttca
tgtcataagcttccacttgaacaaagggaagctgcacagaaacaagaagaagcccgatac
agagctttgggttatattaaacctgcaaatgatggtgaagaacctcgtatccatccaagg
ctactacacaagcctctagaagaagttacatgtttcaaatgtggtaccaaaggccactat
gccaacaaatgtcctaaaggtcacctggccttcctgtcgaatcaacagggcaaccagaac
aatcatccatttaaaaaaccaaactag
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