Bicyclus anynana (squinting bush brown): 112045691
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Entry
112045691 CDS
T07476
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112045691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bany03041
]
112045691
03009 Ribosome biogenesis [BR:
bany03009
]
112045691
Enzymes [BR:
bany01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112045691
Spliceosome [BR:
bany03041
]
Complex A
U2 snRNP components
U2 related factors
112045691
Complex B
112045691
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112045691
Ribosome biogenesis [BR:
bany03009
]
Eukaryotic type
90S particles
Helicases
112045691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
ABC_tran
Flavi_DEAD
T2SSE
AAA_7
AAA_25
TsaE
Motif
Other DBs
NCBI-GeneID:
112045691
NCBI-ProteinID:
XP_023937742
EnsemblRapid:
LOC112045691
UniProt:
A0A6J1MXT6
LinkDB
All DBs
Position
26:859043..877292
Genome browser
AA seq
732 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREEKAAAAARAGESSDSVATLGTAPPPTATSTPGVNPYTGLPHS
TRYHDLLRRRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWCVEFSAVTAGK
SHGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLRE
AMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRTDLKLVIMSATLDAGKFQQYF
DNAPLMNVPGRTHPVEIFYTPQPERDYLEAAIRTVIQIHICEEITGDILLFLTGQEEIED
ACKRIKREIDNLGPDVGELKCIPLYSTLPPNLQQRIFEPAPPNRANGAIGRKVVVSTNIA
ETSLTIDGVVFVIDTGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRL
YTEKAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLN
YLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPN
EARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQL
SRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQVVQLHPS
TCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLRIAPQYYELNNFPQCEARRQLELLQ
TRLDSKAYQEGF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagaaggattgaagtgatggacccgttcatcaagaaaaagagggaggagaag
gcagcggccgcggcgcgcgccggcgagtcttcggactccgtggccacgctggggactgcg
ccgccgcccaccgccaccagcacgcctggagtcaacccctacacaggtcttcctcactca
acgcgttaccacgacctcctgcgacgtcgcctcggccttccggtgtgggagtataagaac
gacttcatgagactcctcaacacacaccagtgtgttgtgttggtcggcgaaacaggctct
gggaaaacaacacaaataccacagtggtgcgtcgagttctctgctgttacagcggggaag
tcccatggagtcgcttgcacgcagcccagaagagtagcagccatgtcagtggcacaacga
gtggcagaagaaatggacgtcgctttgggacagcaagtcggttacagcatccgttttgaa
gactgttccggaccacagacagtgttaaaatacatgacagacggtatgttactccgtgaa
gccatgtctgatccgatgctagaacaataccgagtgatactgctcgacgaggctcacgaa
aggactctagcgacagacatcctcatgggagtgttgaaagaggttataaaacaacgcaca
gatttaaaattagtcatcatgtcagccacattagacgctgggaagttccaacagtatttc
gacaatgctccgctaatgaatgtacctggtagaactcatcccgtagaaattttttacacc
ccccaaccagaaagggactacctagaagcagcgatacgcacagtcatacaaatacacata
tgcgaagaaataaccggtgatatactgctgtttttgacggggcaagaggaaatagaggat
gcttgtaagcggataaaacgagaaatagacaatttgggtccagacgttggtgaactgaaa
tgtatacctttatactcgacattgccaccaaatcttcagcaacgtatatttgagccggca
ccaccaaatagagcaaacggtgctattggaaggaaagttgtcgtatcaaccaatatagca
gaaacttcgttgactatagacggagttgtgttcgtaatagatacaggtttctccaaacag
aaggtgtataaccccaggatccgtgtggagtccttgttagtgtcccccataagcaaagca
tcggctcaacaaagagctggtagagccgggagaacgagacctgggaaatgcttcaggctg
tacacggagaaggcttacaagaatgaaatgcaagataacacttacccggaaattttgaga
tcaaacttaggatctgtagttttgcagttgaaaaagctgggtatcgacgacctggtgcac
tttgacttcatggacccgcccgcgcccgagacgctgatgcgcgcgctcgagctgctcaac
tatctggccgcgctcgatgacgacggcaacctgactgacctgggcgccgtgatggcagag
ttcccgctggacccgcagctcgccaagatgctgatcgccagctgcaaccacaactgctcc
aacgagatcctctccatcactgccatgttgtctgtcccgcaatgcttcgtgcggccgaac
gaagcgcgcaaggcggcggacgaagcgaagatgcgcttcgctcacatagacggcgatcac
ttgacgcttctcaacgtgtatcacgccttcaaacagaacatggaggacccgcactggtgc
tacgacaacttcatcaactaccgctcgctcaagtcgggcgacaacgtgcgccagcagctc
agtcgcatcatggacaggtttaacctcaagcggacgagcacggagttcaccagcaaagac
tattatatcaatattaggaaagctctcgtcaatggattctttatgcaggtggcacacctg
gagcgcacgggccactacctgacagtgaaggacaaccaggtggtgcagctgcacccctcc
acctgcctcgaccacaagcccgactgggtcatctacaacgagttcgtgctcaccaccaag
aactacatccgcaccgtcaccgacatcaaaccggagtggctgcttcggatcgcgccgcag
tactacgagctgaacaacttcccgcagtgcgaggcgcggcgccagctcgagctgctgcag
acgaggctcgactccaaggcctaccaggagggcttctag
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integrated database retrieval system
