Bicyclus anynana (squinting bush brown): 112046192
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Entry
112046192 CDS
T07476
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03013
Nucleocytoplasmic transport
bany03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112046192
09122 Translation
03013 Nucleocytoplasmic transport
112046192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112046192
03041 Spliceosome [BR:
bany03041
]
112046192
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112046192
Spliceosome [BR:
bany03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112046192
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
NOCA1_mid
RWD
ATG33
Motif
Other DBs
NCBI-GeneID:
112046192
NCBI-ProteinID:
XP_023938510
UniProt:
A0A6J1MSA8
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All DBs
Position
14
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AA seq
690 aa
AA seq
DB search
MGKDDLSTKKRRKLTTQTSNDAKLLPGDVYKRVVEFEESEAQIRSADKDACLFKKLCQDV
RQIFSDVAELKAKGTDEAIEKITAKKIEASLILVALKKLNRLEKVRTRAGRDALHKEKQR
VDSTHLLLQNLLYEADHLDKEVTKCLQFKSKDEEIELVPIKDFYRDAPAEISRPDITKTD
EHQQQLARLEWELRQRRELAGVCSELVASKERVAAAIAAARSRLDALGPHLKDVLKATKP
LQECLALRLDEKRAETQAAALLPPPLFLLYANAGAYSDVLGAKNVTVAISGDEDEARRQE
QVTNEESDVVLSNDSDSDLDNIDEDLRDSKKKRHHRTAKISKEEKAEAKKKEVLKMHPLN
VHVTVKNSDETSLNLVFSYMIHLKIVVVKFIMNVSKPVTGVSAADVLTGDCVLTELYIGD
TGSDSPHPATAYLLNAAGISEPFSHFISEIGKPYIWAQRMCGLDFMTIVSGENKSNMNIQ
PCQSLSVTSVENFIFTLKKRLKARVELMKELQDLESGKIVPSKGFSCSLKLSGSLTQWQS
ITWHEYSQAPSTAHFISENLVTEANMLYRAIVTRQSAKLVALVAVCSDYPKKAPLFSLTM
HWNGTHNALTNDDIRDIERVINTDWDPSAKVPCTLSSQIMKLLTCLDVLLESMGSPEFPP
DKVMLQSVRGRNRMKPYKFLKQGAGVFVQY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatgatctttctacaaagaaacgccgcaaattaacgacccaaacttccaac
gacgctaagttgttaccgggtgatgtttacaagagagttgttgagtttgaagagtctgag
gcacagattcgatcagctgataaagatgcttgtttgttcaaaaagttatgccaggatgta
cggcaaatattttctgatgtggcagagttgaaagctaagggtacagatgaggctattgaa
aaaattaccgccaagaaaatagaagcatcattaatattggttgctttaaaaaaactgaat
agactggaaaaagttaggacgcgggctggtagagatgcgctgcacaaagaaaaacaaaga
gtggattctacacatctactgctgcagaacttactctacgaagcagaccatcttgataaa
gaagtaactaaatgtctacagttcaaatcaaaagatgaggaaatagaacttgttcctatc
aaggatttttacagagacgcaccggctgagatttcacgccctgatataaccaaaacagat
gaacatcaacagcagttagcgaggctagaatgggagttacgtcagcgaagagagcttgct
ggtgtttgtagtgaacttgtagcttcaaaagagcgtgtggcggctgccatagctgctgct
cggtcgagattagatgctctaggacctcatttaaaagatgtattaaaagcaacgaaacct
cttcaagagtgcttggctcttaggctagatgagaaacgtgcagagacacaggctgctgct
ctactgccaccaccattgtttttgctttatgctaatgctggtgcctactctgatgttctt
ggcgctaagaatgtaactgttgctattagtggagatgaagatgaggcaagaaggcaggag
caggtaacaaatgaagagagtgatgtagttttgtctaatgattcagattcagacctagat
aatattgatgaggatctcagagacagtaaaaagaaaaggcatcatagaactgcaaagata
tccaaagaagaaaaagcagaggccaaaaagaaagaagttcttaaaatgcatccactcaat
gttcatgtaactgtgaagaattctgatgaaacttcacttaacttggtattttcttacatg
atacatcttaagatagtggttgtaaaatttatcatgaatgtttcaaagcctgtaactgga
gtgtcagcagctgatgttctgaccggcgattgtgtgctgacagaactgtatattggcgac
acgggtagcgactcaccacaccctgctacagcatacttgctgaatgctgccggcatatct
gaacctttttcacatttcatctctgaaattggaaaaccgtacatatgggctcaaagaatg
tgtggcttagattttatgactattgtttctggtgaaaataaatctaatatgaatattcag
ccttgtcaaagccttagtgttactagtgtggaaaatttcatttttacattgaaaaagaga
ttaaaagcaagagttgaattaatgaaagaacttcaagatttggagtctggtaaaattgta
cccagtaaagggttctcatgttctttgaaactatctgggtctttgacccaatggcagtca
ataacttggcatgagtacagccaagcgccttcaactgcacatttcatatcagaaaacttg
gtcactgaagcaaatatgttatatcgtgcaattgttacacgacaatctgcaaagctggtt
gctttagtggcagtgtgtagtgattacccaaaaaaggcacctctattttcattgactatg
cactggaatggaactcacaatgccttgaccaatgatgatatcagggacatagaaagagtg
ataaatacagattgggacccaagtgcaaaagtgccatgtactctttcatctcaaatcatg
aaactactgacttgtctggatgtcctcttagaatcaatgggatctcccgagtttccacct
gacaaagtcatgttgcagtctgtgagaggacgtaataggatgaagccatataaatttcta
aaacaaggtgcaggagtttttgtgcagtactaa
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