Bicyclus anynana (squinting bush brown): 112049065
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Entry
112049065 CDS
T07476
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03018
RNA degradation
bany03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112049065
09123 Folding, sorting and degradation
03018 RNA degradation
112049065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112049065
03041 Spliceosome [BR:
bany03041
]
112049065
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112049065
mRNA degradation factors
5'-3' decay
Lsm complex
112049065
Spliceosome [BR:
bany03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112049065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
112049065
NCBI-ProteinID:
XP_023942590
UniProt:
A0A6J1N3Y5
LinkDB
All DBs
Position
11:10978842..10979316
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AA seq
95 aa
AA seq
DB search
MAQALPSPNTLLPLELVDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTP
EGRKITKLDQILLNGNNIAMLVPGGEMPGDAYDGH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcactgcccagtccaaacacattgctaccactcgaacttgtagacaaatgt
attggatcgcgcatacacataattatgaaaaacgacaaagaaatggtgggaacactgcaa
ggtttcgacgatttcgtcaatatgttgttagacgatgtgacggaatacgaatcaacgcct
gaagggaggaagatcacaaaattggatcaaatattgttaaatggtaacaatatagctatg
ttggtgcctggcggcgaaatgccgggcgatgcgtacgatggacattga
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