Bicyclus anynana (squinting bush brown): 112049135
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Entry
112049135 CDS
T07476
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112049135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112049135
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112049135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_WDR11_2nd
Beta-prop_ACSF4
WD_LRWD1
Beta-prop_IP5PC_F
Frtz
Motif
Other DBs
NCBI-GeneID:
112049135
NCBI-ProteinID:
XP_023942696
UniProt:
A0A6J1NHV3
LinkDB
All DBs
Position
19:6578801..6581768
Genome browser
AA seq
853 aa
AA seq
DB search
MDFGTPPPNLSMPPPGMGGPMGPPGRNIRHNFRPFNYQMRFPAQGPLNMTQDDFDGKRLR
KSVMRKTVDYNSSIIKALECRVWQRDWRDRYALQPDAMYTPDLLPPPSYPDNPINAVTTR
FVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVW
SHGEGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDSKIVTCSDDGTLRIF
DFYRCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKSGTALSTLHAHKS
TVMDLQWNENGNWLITASRDHLLKLFDIRKLGTELQIFRGHKKEASSVVWHPTHEGLFCS
GGSDGTILFWNVGTDKEVGCIEGAHESIVWTMAWHPLGHILCSGSNDHTSKFWTRNRPGD
QMRDKYNLNTLPPGVQDDNELEEPAAIPGMGPEDKVEIFSSDTDKVIPGLDLDTTMMPME
FEKKVKKVPYSKPIPRNFQVQWNHGPTVDDAATEALTQALVESVPGAVPLQQLTPTAIFI
YGRLISVEPGSKLEKAISEGPISLRKYIATGDIEELEDMMPHLEHDAEDDNFLQPFEYPS
QDTNENENNAGDDENNDKNDYDKEEYYDNEMDTSEQNQDDYNNYDNGPPDMNNMMPMGNM
PPMGFMGPPMNMGPPMGPPPMGPPPMHGGGMHMPPPHMPPMGNMPPMGNMPPMGPMPPMN
NMNTRPMFPDNGFNKGHYDSNQSYSQENEDYNEEESYNNEEENYNDEDNNSEDNNYGRNQ
RWGGGYRGRGQDRSPNRGRGQDRGRGHDRGRGRGMNGFGARNMRRGGNQRGSSWNRRGSG
ANRMFRRGGKQTN
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggattttggaacccctcctccgaatttgagcatgcctccacccggcatgggtggaccc
atggggccgccaggccgtaacattcgccataatttcagacctttcaactatcaaatgcga
ttccccgcccagggtcctctgaatatgactcaagacgacttcgatggtaaacgtttacgt
aaatcagtaatgcgtaaaactgtagattataattcttcaattataaaagccttagaatgt
cgcgtttggcaaagagattggcgggacaggtatgccttacaaccggatgccatgtacacg
cctgacttactaccgccgccttcgtacccagataatcctataaatgctgttaccactcga
tttgttaagactgctactaataaaatgagatgtcctattttcgctgttgcttggacgcct
gagggacgcaggttaataacaggtgcttcatctggagagttcaccctatggaatggatta
acatttaattttgaaactattctacaagctcacgattcgcctgtgagatccatggtatgg
tctcacggtgaaggttggatggtgacaggagatcactctggttttattaagtattggcag
agtaacatgaataatgtaaaaatgtatcaagctcataaagaagcagtaagaggtattagt
tttagtcctagtgattcaaagatagttacttgttcagatgatggcacactgcggatattt
gacttttatagatgtcaagaggaaaggattttaagggggcacggtgcagatgttaaatgt
gtgcagtggcacccaacaaaggctctcattgtatctggcagtaaggataatcagcaacca
ataaagttatgggatcccaagtcgggtacagcattatcaactttacatgcacacaaatct
acagtaatggacttgcagtggaatgaaaatggcaactggctaataacagcatcccgagac
catttgttaaaactttttgacattcgtaagcttggcactgagcttcaaatattcagaggc
cacaagaaagaggcgtctagtgtagtatggcatcccactcatgagggcttgttctgttct
ggtggctctgatggaactatcttattttggaatgttggtactgataaggaagtaggatgt
atagaaggtgctcatgagtctatagtttggacgatggcttggcatcccttgggccacata
ctgtgctcgggatcaaatgatcacacatcaaagttttggacccgcaatcgcccaggtgat
cagatgagggataagtataatctgaacacattacctccaggtgttcaagatgacaatgag
ttagaagagccagcagctattccgggaatggggccggaagacaaggttgaaatattttca
tctgacactgataaagtaattcctggattggatttggatacaacaatgatgcctatggag
tttgaaaagaaagttaagaaagttccttacagcaagcctataccgagaaacttccaggtt
cagtggaatcatggtccaacagtagatgatgcagcaacagaagctttaacgcaagctcta
gtggaatctgtcccaggagcagtccctttacaacaactgactcctactgctatattcatt
tatggaaggcttatatcagtagagccaggatcaaaacttgaaaaagctattagtgaaggc
ccaatatccttgagaaaatatattgcaacaggtgatattgaagaattagaagatatgatg
ccacacctggagcatgatgctgaggatgataactttctgcagccatttgaatatccctct
caagataccaatgagaatgaaaataatgcaggtgatgatgaaaataatgacaaaaatgat
tatgataaggaagagtattatgataatgaaatggatacaagtgaacaaaaccaggatgac
tacaataactatgataatggaccaccagatatgaataatatgatgccaatgggaaatatg
cctccaatgggattcatgggacctccaatgaatatgggtcctcctatgggccctccccca
atgggtcctcccccaatgcatggtggtggtatgcacatgccccctccacatatgccacca
atgggtaacatgcctccaatgggtaatatgccaccaatgggtcctatgcctcctatgaac
aatatgaatacaaggccaatgttccctgataatggttttaataaaggacattatgacagc
aaccagtcatattctcaagaaaatgaggattataatgaagaagagtcatataataatgag
gaggaaaattacaatgatgaagacaataatagtgaagacaataattatggccgaaaccaa
agatggggtggtggttacagaggaagaggtcaggatagaagtccaaacagagggagaggt
caagatcgtggcagaggacacgaccgaggtagaggacgcggtatgaacggttttggggcc
cgcaacatgcgtcgaggaggcaaccaacgagggtcctcttggaatcgtcggggcagtggt
gccaatcgaatgtttcgaagaggtggtaaacaaactaattaa
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