Bicyclus anynana (squinting bush brown): 112049522
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Entry
112049522 CDS
T07476
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112049522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112049522
Enzymes [BR:
bany01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112049522
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112049522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
FtsX_ECD
Motif
Other DBs
NCBI-GeneID:
112049522
NCBI-ProteinID:
XP_023943220
UniProt:
A0A6J1N5W7
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All DBs
Position
11:complement(2441827..2504381)
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AA seq
650 aa
AA seq
DB search
MEITRKNFKEALPLIGASIEKADFLVMDAEFTGLLNGRDVTIFDSPQDYYTTLLNGATDF
LLIQYGLCAFCWNDDTKQYTNESYNFYLFPRGRPGPEKMFLCQSSSLDFLAAQGFDFNKL
IKEGISYMTEPTETRLRENLTDRQSRTNDKESITIPEENRSYIEGICKKVREFLNDDKSE
EMEIDRCNAFIRRLLFQELGARFKNEAFVESKVLENKNRVLKVTKLKSVSEVKDLDTQKK
EKEWEEFEEAVGFSKVARMISQSGKLVIGHNMLLDVMHTLNHFFQPLPPDYASFKEFAHC
MFPRLLDTKYMSSLPPFKDKVNSSVLNHLLITLSEAPFSLPEAESESGRGYTRSDEKAHE
AGYDAYVTGLCFLSMHAHLASMRGERRARVAGSADSVLLKPFVNKLFLAKTAHQDSPYIN
LTGADPTPSRDHVFHLTFPKEWQRNDINQLFSAYGQITVQFLDDTSALVALSRKDLAKTV
VRAFASNSRISLVPYLRYKALSNKSASQLERREEASEKFAKLHPDSTAIARRGNVSIPPA
ARPAEVSRSRAQSASHGAPAAQPARKRTSSGMFQVEDSEPPPKKTEGTAENAKEQNNVTV
LSNGRRKRTDSGKEKAKERKKETDIVIKCSFNSDKPGECVSAFKESDSWD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaaataactagaaaaaattttaaagaggcattgcctctaatcggtgcgtctatagaa
aaggctgactttttagtgatggacgcggagtttaccggcttactaaatggacgcgacgtg
acaatattcgattcccctcaggattactacactacactgttgaatggcgccacagatttc
ttgttaatacagtacggattgtgcgccttttgctggaacgacgacacgaagcagtatacg
aacgagtcgtacaatttctatttgttcccgcgcggccggccgggccctgagaaaatgttt
ttatgccagagttccagcttagacttcttggctgcacagggatttgattttaataaatta
attaaagaaggtatatcttatatgacggagcctacagaaactaggctaagagaaaacttg
acagatcgacaaagcagaaccaatgacaaagaatctattacaatccctgaggagaacaga
agttacattgaaggcatatgtaaaaaagttcgtgaatttttaaatgatgacaaatcagaa
gagatggagatcgaccgctgcaacgctttcatcaggcggttgctgttccaagagttgggc
gcgcggttcaagaacgaggcatttgtagagtctaaggtcttagagaataagaacagggtg
ttaaaagtgactaaattaaaatcagtcagtgaggtcaaagatctggacacacagaagaaa
gaaaaagagtgggaggagtttgaagaggcagttggcttttcaaaggttgctaggatgatc
agtcaatcgggaaagttagtgatcggccacaacatgttgctggatgtgatgcacacgctc
aaccacttcttccagccgctgccgcccgactacgcctccttcaaggagtttgcgcactgc
atgttccccaggttattagacaccaagtacatgtcgagtctaccgccattcaaagataaa
gtgaactcaagtgtgctgaatcacttgctcatcacactatcggaagcaccattctcgctg
cctgaagctgagtctgagagcgggcgcggctacacgcgctcagacgagaaggcgcacgag
gcgggctacgacgcgtacgtgacggggctgtgcttcctgagcatgcacgcgcacctggcg
agcatgcgcggcgagcggcgcgcgcgcgtcgctggctccgccgactccgtgctgctcaag
cccttcgtcaacaagctgttcctggccaagacggcgcaccaggactcgccttacatcaac
ctcacgggcgctgacccgacgccgtccagagaccacgtgttccacctgacgtttcccaaa
gagtggcaaaggaacgacatcaaccagttgtttagcgcatacggtcaaataacagtgcag
ttcctggacgacacgtcggcgctggtggcgctgtcgcggaaggacctcgccaagactgtc
gtgcgcgccttcgccagcaacagtcggatatccttggtgccgtacctcaggtacaaggcg
ctctccaacaagtccgcgagccagctggagcgacgcgaggaagcgtcggaaaagttcgcc
aaattacacccagacagcactgcgatcgcccgccgaggtaatgtaagcattccccccgcg
gctcggccggcggaggtgagtcgcagccgggcgcagagcgcatcgcacggcgcgccggcg
gcgcagccagcacgcaaacggacctcttccggaatgttccaggttgaagatagcgaaccc
ccaccaaagaagacagaaggcaccgcagaaaatgcaaaagagcagaacaacgttacagtt
ttgtcgaacggacgtagaaaacgcactgacagtggaaaggagaaggcgaaggaaaggaaa
aaagaaacagacatagtcataaagtgtagtttcaacagtgacaagccaggcgaatgtgtg
tccgctttcaaagaaagcgatagttgggactaa
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