Bicyclus anynana (squinting bush brown): 112049721
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Entry
112049721 CDS
T07476
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112049721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bany03021
]
112049721
03036 Chromosome and associated proteins [BR:
bany03036
]
112049721
Transcription machinery [BR:
bany03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112049721
Coactivators
SAGA/TFTC/STAGA complex
112049721
Chromosome and associated proteins [BR:
bany03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112049721
STAGA complex
112049721
TFTC complex
112049721
SAGA complex
112049721
SLIK complex
112049721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Ge1_WD40
Beta-prop_DCAF4
eIF2A
DUF7165
VPS8_N
Motif
Other DBs
NCBI-GeneID:
112049721
NCBI-ProteinID:
XP_023943497
UniProt:
A0A6J1NET7
LinkDB
All DBs
Position
3:10203833..10213078
Genome browser
AA seq
651 aa
AA seq
DB search
MGDKSTPLLAVLQLLRKYNLKGTEDILRKEANLGDVEYENLDLPEVELANILTAHHTESD
PYSYEFAYDSLKKFVENSLDVYKYELSTLLYPVFVHMYLILILYDHNEHAIKILEKFGPE
QDEYYQDDLKRLCAVKNKDQVKGNELAEIYSSNKFQVQLSRDASTQLKRYLHEQKSSPII
INIIKNHIQIDVCDGPGRSHAQVKSTLGGLLGEASRNENRTKVYYGLLKEPDLQILPAQI
EDEEEAEETPDKPKKKKAKKDNIFMKKPKSDPNAPPNDRIPLPDLKENDKVEKGKALREA
AKRVQLGPECLPSICFYTLLNSGHTAICADICDDSTLLAVGFNNSTIKVWTLTTVRLRGM
KSADKLQDIDREAGDVLVRMMEEKDRETCRTLFGHSGPVYKVSFDPFKTMLLSCSEDSTI
RLWSLQCWTCIVVYRGHVWPVWDTRWSPHGHYFASGGHDRIARLWATDHHQPLRIFAGHL
SDIDCIQFHPNSNYIATGSSDRTVRLWDCLTGTQVRIMTGHRSTPFTLAFSACGRWLASG
GGAGEIQIWDLSSGLPSAAIPPASNSPIHALAFSRDGTILASGSLDSTIKLWDFAIISDE
NINEENGNAAPTQKEDKFLLRSYATKNSPIKSLHFTRRNLLLAVGSYDGSV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaaatctacaccattactagccgttctacaactactaaggaaatataatttg
aagggcactgaggatatcttgaggaaagaagcgaatttaggcgatgtcgagtacgaaaat
ctagatttgcccgaggttgaactcgcaaatattcttactgctcatcataccgaaagtgac
ccttatagctacgagttcgcttatgacagcctcaaaaaattcgtggagaattctttagac
gtatataagtatgagttgtctactctgctttatccagtgtttgttcacatgtatctaata
ctaattttgtatgatcacaatgagcatgcaataaagattttagaaaaatttggaccagaa
caagatgagtactatcaagatgacttgaaacggttatgtgctgttaaaaataaagatcaa
gttaagggcaatgaacttgccgaaatatacagttccaacaaatttcaagttcagctttca
agagatgcttctacccaattaaaaagatacctgcatgaacagaaaagttcaccaatcatt
ataaatataattaaaaatcatatacaaattgatgtgtgcgacggacctggtagaagtcat
gcccaagtgaagtcaactctagggggacttctaggagaagcgtctcgcaatgagaaccgt
accaaagtttattatggacttttgaaagagcctgatttacaaattttacctgcacaaata
gaagatgaagaagaagctgaagaaactccagacaaacccaaaaagaagaaggcaaagaaa
gataacatttttatgaagaagccaaaatcagacccaaatgcacctccaaatgacagaatc
cctctacctgatctgaaggagaatgacaaagtagaaaaaggcaaagcgttaagagaggca
gcgaaacgtgtacaactgggtccagagtgtttgccctccatctgcttctacactctcttg
aacagcggccacaccgcgatatgcgccgacatctgtgacgactccacactgttagctgtg
ggcttcaacaactctaccattaaggtatggactttgacaactgtaagactgcgaggcatg
aagtctgctgacaaattgcaggatattgacagagaagctggtgatgtccttgtgagaatg
atggaagagaaagacagagaaacatgccgcaccctgtttggacactcgggccccgtctat
aaggtgtcatttgaccctttcaagaccatgctgttatcttgctcagaggattccaccatc
cggctgtggtcgctccagtgctggacttgcatagtggtataccgcggacacgtgtggccg
gtttgggacacgcgctggtcgccacacggccactacttcgcgtcgggcggccacgaccgc
atcgcgcgcctgtgggccaccgaccaccaccagccgctgcgcatcttcgcaggacatctc
tcagacatcgattgcattcaatttcatcctaattcgaactacatcgccacgggttccagc
gaccgcaccgttcgcctgtgggactgtttgactggcacccaagttcgaatcatgactggc
cacaggtcgacaccttttactcttgcattctctgcgtgcggacggtggctggcatcgggc
ggcggcgccggggaaatacaaatatgggacctgtccagcggactgccgagcgctgcgata
ccgcccgccagcaactcgccaatacacgccttagctttcagtcgagacggcaccatctta
gcatcaggttcattggattccacaataaaactgtgggattttgccattatttctgatgaa
aatataaatgaagagaatggaaatgctgcacctactcaaaaggaagataaatttttgcta
cgctcttatgctacaaagaattcacccataaaaagtttacattttacacggcgcaatctt
ctgttagccgtgggatcatatgatgggagtgtatga
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