Bicyclus anynana (squinting bush brown): 112050160
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Entry
112050160 CDS
T07476
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bany03041
]
112050160
Enzymes [BR:
bany01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112050160
Spliceosome [BR:
bany03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112050160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
YTH
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
Ank
AAA_19
Ank_4
Ank_5
nSTAND3
AAA_22
AAA_14
HA2_N
AAA_25
UvrD-helicase
T2SSE
ATPase_2
Viral_helicase1
Cas3-like_C_2
SRP54
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
112050160
NCBI-ProteinID:
XP_023944113
UniProt:
A0A6J1NGL0
LinkDB
All DBs
Position
17:complement(15803597..15819960)
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AA seq
1362 aa
AA seq
DB search
MSSKKGKRNLGGKHFPIAESVSIALKIQLDKFLSDEHETELKFPTFLSAQERGFIHETVA
KLGLKSKSRGKGVNRYLTIYKRLGSTIIQNDAKLILDSNMRFTIGELFNAFPITSKEKDD
LSTCTEKERSPQLAHKTLGPLNNGLPQIPNTSYNPDLLKFREKLPVYEQRQDLINAILHN
QVIIVAGATGCGKTTQLPQLILDHFQEHKQPARIYCTQPRRISAVSVAERVAYERMEKIG
QSIGYQIRLESRVSMRTVLTYCTNGVLLRTLMAGDTALTGVTHVLVDEVHERDKFSDFLL
IALRDALARLKDLKLVLMSATMDTQIFSRYFNNCPVITIPGRLHEVQRHYLEDILKMTQY
NTKRMMQIERELKAKLKTGHSFWSHLEGQKQVQEESSKEEKDTQIDPALQADMDEFLDEC
FNEDSLDSFSQILYMFLSEGVPTECAHSRCGRTALMAAAARGLADTLQQMLRIGADPSTK
DKNGKTAYDHAIDNGHAECAKMLASFNLIEEPKNNQDDENQADNFLLDVYNHAVSEELID
HDLMLTLVKHIHLNLPKGSILIFLPGYDDIVTLRDLIQGCTEMTAMKHQIFTLHSNMQTL
DQKKVFNPLPNARKIIISTNIAETSITIDDVVYVIDSCKVKEKYYESNGGVCSLQCVWTS
RACCQQRAGRAGRTKPGHCFHMCSKRRFKTLPLNSVPEILRVPLQELCLHTKLLSPGNTP
IADFLSKALEPPSFLAVRNAVALLKTIGALTPMEDLTEIGQHLLDLTVEPKLGKMLLYAC
VMKCLDPILTIVCCLANKEPFQISMNPENRKKGGLARKEFAADSYSDHMALLRAFQAWQL
ARQNGTEKPFCSKNLICGATMEMIVGYRSQLLAQLRALSLVKARGSGDIKDVNLNSEKWH
VVKAVLVSGLYPSIARVDRDSGTLRTSKEVKVAFHPSSTLHRGGGANGSAKSVQNLPTDW
VVFEEISRVGRFCFIRCTTLVTPLTVALFSGPIRLPAGALTQRANPPGLSSDSDSEADEN
NSSPDTAVLTLDDWMAFTADASDAISVYYLRQKLCALVIRRMSNPGKPMTPLDEQILSTV
VHVLGAEEKNVGLNQPSGIGQRPKPLTVDSPNWRMRLDEEQYRHENKFYPQYGQTEFGNN
YYHNYYQNQNQNRNNNQRPGWRNDGMPQGFSPQSYSGPKSPMSPNGKTLLANIEKYAENS
EANTRYFVVKTDDAHSVEAAQAGTSFPFTANTGKKLQKIKQEGHRVVLFFSCAHASKFAG
AATLTDASGALDFISTQSVPFHMVRHISNTLGAGGRVAGARDGTEVCAAAGRALLAALAP
RRRHPHQPHQPHQPHQPHQSHQPHQPHQSHQARPIQKHSNDQ
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaagaagggtaagcgtaacttaggcggtaagcattttccaatagctgaatct
gtgagtatagcattgaagatccagctcgataagtttctgagtgatgaacacgagacggag
ttgaagttcccaacgttcctgtctgcccaggagcgagggttcatccatgagactgtggca
aagttggggctgaagtcgaaatcgcgcggtaaaggtgtcaatcgctacctaacaatatac
aaaaggttgggatcgacaataatccagaacgatgccaagctcatactggacagtaacatg
cgctttactattggagaactgttcaacgctttccccattaccagcaaagagaaagatgac
ctgagcacctgtacggagaaggagagaagtccgcagctggctcataagacgctggggccg
ctgaacaatggtctgccacagattccaaacacatcatacaacccagatttgctgaagttc
agggaaaagttgccagtgtatgaacagaggcaggatctcatcaatgctatcttacataac
caggttataatagtggccggagcaactgggtgcggcaagaccactcagctgccgcagctg
atcctggaccacttccaggagcacaagcagcccgccaggatctactgcacgcagccccgg
aggatctccgccgtgtccgtcgctgagagggtagcgtacgagcgcatggagaagataggc
cagtccatcgggtatcagatccgactggagtcgcgcgtcagcatgcgcaccgtgctcacc
tactgcaccaacggggtgctgctgcgcacgctcatggccggggacaccgcgctcaccggc
gtgacgcacgtgctggtggacgaggtgcacgagcgggacaagttcagtgacttcctgctg
atcgcgctgcgcgacgcgctggcgcggctcaaggacctcaagctggtactcatgtccgcc
accatggacacgcagatcttctccaggtacttcaacaactgccccgtgatcaccataccc
gggcgcctgcacgaggtgcagcgccactacctggaggacatcctcaagatgacgcagtac
aacaccaagcggatgatgcagatagagcgcgagctgaaggccaagctgaagactggccac
agcttctggtcacacttggagggccagaagcaagttcaagaagagagcagtaaagaagag
aaagacacgcaaatagatcccgctctgcaagccgatatggacgagttcctggatgagtgc
ttcaatgaggatagtttggactcgttcagccagatcctgtacatgttcctgtccgagggc
gtgcccaccgagtgcgcgcactcgcgctgcggccgcaccgcgctcatggcggcggcggcg
cgcgggctcgccgacacgctgcagcagatgctgcgcatcggcgcggatccatcaacgaaa
gataagaacggcaaaacggcgtacgaccacgccatagacaacgggcacgccgagtgcgcc
aaaatgttggcctccttcaacctaatcgaagaacccaagaacaaccaggacgatgagaac
caagcggacaacttccttctagatgtctacaaccatgcggtctcggaggaactcatcgat
cacgatctaatgctcactctagtgaagcacatacatttaaacttgcccaaaggaagtata
ttgatcttccttcccgggtacgacgatatcgtcaccctgagagacctgatccaaggttgc
actgaaatgacggcgatgaaacaccaaatattcacactccacagtaacatgcaaactttg
gaccaaaagaaagtgttcaatcctctgccgaatgccaggaaaatcatcatatccaccaac
atagcggagacttccataactatagatgacgtggtttacgtgatagactcttgcaaggtc
aaggagaagtactacgagtcgaacggtggggtttgctcgttacagtgcgtttggacctcg
agggcgtgttgccagcagagggcgggccgcgcggggaggaccaaacccggacactgcttc
cacatgtgctccaaacggaggttcaaaaccttgccgctaaattctgtcccagaaatcttg
agggtccccctgcaggagttgtgccttcacaccaagttactgtcgccaggcaacacgccg
atagccgatttcctcagcaaagctttggagcctccgtcttttctggccgtccgcaacgcg
gtggcgctgttgaaaactatcggagctctgactcccatggaggatttgactgaaattggc
cagcatttgttagatttgacggtcgaacccaagttgggtaagatgctgctctacgcttgt
gtcatgaaatgtctggatccaatattgacgatcgtctgttgtttggcgaacaaagaacct
tttcaaatatcgatgaacccggagaacaggaagaaaggtggcctggcgcggaaggaattc
gcagccgacagctactcggaccacatggctctgttgagagcgttccaggcgtggcagctc
gctcgacagaacggaacggagaagccgttttgctccaaaaatttaatatgcggagctacc
atggaaatgatagtcggctaccgctcgcaactgctagcccagctgcgagcgctgagtctc
gtcaaagcgagaggttccggcgacatcaaggacgtgaacttgaactcggagaagtggcat
gttgtcaaggctgttttggtcagcggcctgtatccctcgatagcgcgcgtcgatcgcgat
tccggcaccttgagaacctccaaagaagtcaaagtggcattccacccgagctcgacgctg
caccgcggcggcggcgccaacggatccgcgaagtccgtccaaaacttacccacagattgg
gtcgtcttcgaggagatatctcgggtcgggcgattctgtttcatccgatgcaccacgctg
gtcactccgctgaccgtcgcgctgtttagcggtccaatcagactgcccgccggggctctg
acccagagggccaaccctccagggctgtcgagcgactcggacagcgaggctgacgagaac
aattcttccccagacaccgcagtgttaacattggacgattggatggctttcacagcggac
gcgtccgatgccatcagcgtatactatctgcggcagaagctctgcgctctcgtcattcgg
aggatgtcgaaccccggcaaaccgatgactcccctcgacgaacagatcctcagcaccgtt
gtgcacgtactgggagccgaggagaagaacgtgggactgaaccagccgagcggcatcggg
cagcgaccgaaaccgctgaccgtcgactcaccgaactggcgaatgaggctagacgaggaa
caatacagacacgagaataagttctaccctcagtacggtcagaccgaattcgggaacaac
tactatcacaattactatcagaatcagaaccagaacaggaacaacaatcagaggcccggc
tggaggaacgacggcatgccgcaagggttctcccctcagtcgtacagcgggcccaagagc
cccatgtccccgaacgggaagactctgctggccaacatcgagaagtacgcagagaacagc
gaggccaacacgcggtacttcgtggtgaagacggacgacgcgcacagcgtggaggcggcg
caggccgggaccagcttccccttcaccgccaacactggcaagaagttgcagaaaataaag
caggagggtcaccgcgtggtgctgttcttctcgtgcgcgcacgcgtccaagttcgcgggc
gcggcgacgctcacggacgcgagcggcgcgctcgacttcatctccacgcagagcgtgccc
ttccacatggtgaggcacatctccaacacgctgggcgccggcgggcgggtggcgggcgcg
cgggacgggaccgaagtgtgcgcggccgccggccgcgcgctcctcgccgcgctagcgccg
cgccggcggcacccgcaccagccgcaccaaccgcaccagccgcaccagccgcaccaatcg
caccaaccgcaccaaccgcaccagtcgcatcaagcgcgccccatacagaagcactccaac
gaccaatag
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