Bicyclus anynana (squinting bush brown): 112050353
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Entry
112050353 CDS
T07476
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(I) chain
KO
K19719
collagen type II alpha
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany04512
ECM-receptor interaction
bany04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112050353
04518 Integrin signaling
112050353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bany00536
]
112050353
Glycosaminoglycan binding proteins [BR:
bany00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112050353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
NELL_VWC_C
TILa
Motif
Other DBs
NCBI-GeneID:
112050353
NCBI-ProteinID:
XP_052739744
UniProt:
A0ABM3LKY8
LinkDB
All DBs
Position
10:complement(14463132..14478548)
Genome browser
AA seq
1496 aa
AA seq
DB search
MWQTGVACLALLALPAACKDLVDVREELPQAQEPDLINYDDYNPFGEDDNAILAERDFIG
STSSLPLRYXGXIIXVLVAGPARSCLDMGRTYADGDTWKRDNCTLCQCSTGRVNCSVLPS
CLASPATTRPVPLPPSRPSPVPAPPVRGVAGDRGVDGPPGPPGSPGVNGVPGAPGVPGSV
GTMPDVNAYLAQLAAAAGGDKGPAFDPYHYMQASVGSPGIRGIPGPQGPPGPQGFQGPRG
EPGEAGLPGQPGPAGERGPQGPPGKDGSPGEDGEPGPSGAAGQPGSRGSPGVPGIQGLKG
HRGFDGKDGAKGEQGLPGEKGPTGLPGQMGPPGPLGPVGPRGERGREGPIGPPGMRGVDG
TPGAPGVMGNVGKPGSPGFPGSPGLKGEQGIVGPKGSQGMQGPRGESGRPGQPGEVGPTG
LAGRDGIPGEKGVQGQAGSSGPQGFPGPRGIPGVAGDAGLPGVKGMPGQPGDRGIKGETG
MRGETGGPGPRGLPGALGPEGKRGKRGLRGPAGNIGPQGDRGLQGLRGLPGADGPLGPKG
QPGERGSVGLPGPKGSTGDAGRHGPQGLPGPRGMIGRPGITGKSGHPGERGIPGADGRPG
EQGPQGLQGQPGLIGSPGERGLQGEPGKDGEVGQPGPSGPKGDAGRDGSPGVQGPQGPVG
PTGERGATGPTGPTGYPGLPGSAGLAGAPGKDGEPGVSGPAGPPGAAGPRGERGFLGERG
IPGQPGTPGEKGEAGAQGLDGPPGQEGPRGSKGHPGPMGAMGLPGPRGLTGLSGEKGERG
SAGPQGPEGPTGRQGEQGPQGPIGLTGPPGEPAERGEPGAPGIPGEPGAPGSTGERGQSG
PQGASGLPGPPGLTGMPGLKGDRGYAGAKGQQGSPGNPGIPGEPGLRGLPGQAGAKGARG
EQGLKGDIGHMGLAGRPGDLGPPGPQGSQGPAGSPGIPGAKGASGDAGRPGPAGPQGLTG
SPGPEGVKGERGSEGDTGPQGPPGSTGPAGERGPSGIPGLVGPPGAQGLRGTQGESGAPG
KPGADGTPGHTGAPGLQGPPGPMGEPGPEGRPGKLGQPGIPGRPGDKGPVGQPGQSGLPG
PSGLQGPPGSSGPPGPTGERGPRGESGPAGIEGRQGPTGKQGPPGVDGIKGERGESGADG
AKGHAGLPGLPGMVGAQGRTGDRGLPGPMGPPGKDGDSGARGPPGRDGSIGPQGPVGPPG
GRGSPGEPGRHGAPGPAGPPGPPGPAGEGLAYDAAAIAAMLQQGSIKGPDPLGDDPNIMP
PRFFKDDMTAAEKKSIVMKAYERLKVSLDKFLKPDGSKEAPAKTCGDILYHHPEYESGQY
WIDPNGGDINDAILVHCDMPNGASCVFPKPMMSEELTHTGKNEAWLSELDNGFTISYKAD
HSQLTYLQLLSMKAVQNVTLHCHNMIGYYDPATRNYKHGLKLLAYTDAEVLPKANNRLRY
KALLDECQYKKQEWAKTVVQYESDKAGRLPLLDVAVRDVGRPQQMFKIEVGLACFT
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagacaggagttgcctgtctcgcgctgctggcgcttccagcagcctgcaaggat
ctggtggacgttcgggaggagctgcctcaggcgcaggaacctgatctcataaactatgac
gattacaatccttttggtgaagatgacaatgctatacttgctgaacgggatttcatcgga
tccacatcctctttaccattgcgctattgaggctaaataatctgagtgttggtggcaggg
ccggcgagaagttgcctggacatgggtcggacgtatgccgacggggacacgtggaagcgc
gacaactgcacgctctgccagtgctccaccggccgcgtcaactgctccgtgctgccttct
tgtctggcttcacccgcaaccactcgacctgtgccgttgccaccatcacgacccagtcca
gtgcccgcacctcctgtgagaggagtggcgggggatcggggtgtagacggaccccccggc
ccgcctggctcgcctggcgttaacggcgtacccggcgccccgggcgtacccggctctgta
ggaaccatgcctgatgtgaacgcttatctggctcagttggcagcagcggctggtggcgac
aaaggtccagcgttcgatccttatcactatatgcaggcatcggtcggctcgccgggaata
agaggaataccaggtccacaaggcccgccaggtccacaaggttttcaaggccctcgagga
gagcctggtgaagcggggcttcctggacagcctggtccggcgggagaacgcggaccgcaa
gggcctcccggaaaagatggatcccctggtgaggatggtgagcccggtccttcgggagcg
gcaggtcaaccaggttctcgaggtagtccaggcgtaccaggcatccaagggttaaagggc
catagaggctttgatggcaaagatggcgcaaaaggtgaacaaggattgcctggcgaaaag
ggaccaactggattgccaggtcaaatgggcccaccaggacctttgggccctgttggaccg
cgaggtgaaagaggtcgtgaaggccccatcggtccgcctggtatgcgaggcgttgatgga
actccaggggccccaggagttatgggtaacgttgggaaacctggttctccaggctttcct
ggttcaccaggccttaaaggtgaacaaggcatagtaggacccaaaggaagccagggtatg
caaggcccgagaggtgagtctggacgacctggtcagcctggagaagttggaccgacaggc
ttagctggacgagatggtattccgggtgaaaagggtgtgcagggtcaagctggttcatcg
ggacctcaagggttcccagggcctcggggcatacctggtgttgctggtgatgcaggatta
ccaggagtgaagggtatgccgggacaacccggtgaccgtggtataaaaggtgaaactgga
atgcgtggagagacaggaggtccaggtcctcgtggtttaccgggagcccttggaccagaa
ggaaaacgtggcaagaggggtttgagagggccggctggtaatattggacctcaaggcgac
agaggtttgcaaggattaagaggtttgccaggggcagatggaccgttaggtcctaaaggc
caacctggtgaaagaggaagtgttggattacctggaccaaaaggaagtactggtgatgca
gggaggcacggacctcagggcctgccaggaccaagaggtatgattggaaggccaggaatt
acaggcaagtcggggcatcctggagaaaggggtatacccggtgctgatggtagaccgggt
gaacaaggaccgcaagggttacaaggacagccagggttaataggcagcccaggagaacgt
ggcttgcagggtgaacctggtaaagatggtgaagttggacaacctggaccatctggtcct
aaaggtgatgcagggcgtgatggtagtcctggcgtccaaggtccacaaggccctgttggt
cctacaggtgaaagaggggctacaggtcccaccggacccactggttaccctgggctgcct
ggaagtgcaggcttagccggtgctccaggaaaagatggagaaccaggtgtgtctggtccg
gctggacctccaggggctgccgggccacggggagaacgtggttttcttggtgaaagaggc
ataccgggacaaccaggaacaccaggagaaaaaggcgaagcgggtgcccaaggccttgac
ggcccaccgggtcaagaaggtccacggggtagtaaaggtcaccctggtccaatgggagca
atgggattacctggtccacgtggcttaactggtttgtctggcgaaaagggagaaagaggc
tcagcgggaccacaaggacctgaagggccaacaggtcgacaaggagaacaaggtccacaa
ggtccaattggactgactggaccaccgggtgaacctgctgaaaggggtgagccgggggca
ccagggattcctggtgagccaggagcacccgggtcaacaggcgagcgtggacaatcgggt
ccccaaggagcgtcaggcttacctggtccaccagggctaactggcatgccaggattaaaa
ggagatcgaggttatgctggggctaaaggacaacaaggaagtccgggtaatccaggaatt
ccgggagagccaggcctgcgaggcttacccgggcaagcaggagctaaaggagctcggggt
gaacaagggcttaaaggtgatattggtcacatgggactagcgggtaggccaggagattta
ggaccacctggtcctcaaggaagccaaggtccagctgggtcacctggtatacctggcgca
aaaggagcttcaggtgacgcaggaagaccaggccctgctggacctcaaggattgactgga
tctccaggacctgagggagtaaagggtgagagaggcagcgaaggagataccggacctcaa
ggaccacctggttccactggtccagcaggggagagaggaccaagtggtataccaggtcta
gttggtccgcctggagcacagggattaagaggaacgcagggtgaaagtggagctcctggc
aagccaggtgcagacggaacacctggacatactggtgctcctggactgcaaggacctcct
ggaccaatgggtgaacctggaccagaaggtcgtccgggtaaacttggtcagcctggtata
cctggaagaccgggagataagggaccagtgggacaacccggacaatctggactcccagga
ccttcaggattgcagggtcctcctggttcatctgggccgcccggacccactggtgaaaga
ggtccaagaggagaatctgggccagcaggcattgaaggacgccagggccccacaggaaaa
caaggcccacctggggtagatggtatcaaaggagaacgtggagaatcaggagcagatgga
gctaaaggtcacgcaggcttacccggattacctggaatggttggtgcccaagggagaact
ggggacagaggactaccagggccaatgggaccgcctggaaaagacggtgattcgggagcg
agaggtccgcctggccgtgatggaagcattggtccacaaggtcctgtgggtccacctggt
ggtcgcggttctcctggtgaaccaggacggcatggcgccccaggacccgcgggtccaccg
ggaccccccggtccagcgggagaaggacttgcatatgatgctgccgctattgctgctatg
cttcaacaaggttccatcaaaggaccagacccgttaggtgatgatccaaacataatgcct
ccaagattcttcaaagatgacatgactgcggcggaaaagaagagcatcgttatgaaagct
tacgaacgactcaaagtgtctctcgataaattcttaaaaccagacggttccaaggaagcg
cctgctaagacatgtggcgatatattgtatcatcatcctgaatatgaaagtggtcagtac
tggatagatcctaacggaggagacataaacgacgcaatactggtacactgtgacatgcca
aacggtgcaagctgcgtgttccctaagccgatgatgtctgaagagctaacacacactgga
aagaacgaagcgtggctaagtgaactggataacgggtttacgatctcatataaagcggac
cacagccaactcacgtatctccaactcctatcaatgaaggcggtacagaatgtgacgctg
cattgtcacaatatgatcggctactacgaccccgcgacgaggaattacaaacacggtctg
aagttgctcgcttacactgacgcggaggttttaccgaaagctaacaacaggctcagatat
aaggctctattggacgagtgtcagtacaagaaacaagaatgggcgaaaacagtggtccag
tacgagtcggacaaggcaggtcgactgccacttcttgacgtggcggtgagggacgtcggc
agaccgcagcagatgttcaagattgaagttggtctcgcttgctttacatag
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