Bicyclus anynana (squinting bush brown): 112050357
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Entry
112050357 CDS
T07476
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112050357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112050357
Enzymes [BR:
bany01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112050357
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112050357
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112050357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_LRWD1
LRR_4
Motif
Other DBs
NCBI-GeneID:
112050357
NCBI-ProteinID:
XP_052739829
UniProt:
A0ABM3LL80
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All DBs
Position
10:14154752..14419117
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AA seq
467 aa
AA seq
DB search
MYNNKLRTLPAELGDLIQLRELHLHNNYLRVLPYDLGKLFHLQLLGLQGNPLSKEMLSIY
NDNNGTSKLLTYLLDNMQVTATLPPQRPWIPLTRPNRSRPTCIFTVMCYNVLCDKYATRQ
MYGYCPSWALEWDYRKKGILDEIRHYSADIISLQEVETDQFYAFFLPELKQDGYDGIFSP
KSRAKTMSESERKYVDGCAIFFRTSKFTLVKEHLIEFNQLAMANSEGSDNMLNRVMPKDN
IGLAALLKTKDAAWDNAFNDISGIPTDPSTLAQPILVCTAHIHWDPEFCDVKLIQTMMLS
NELRSILDDSARTLRLSGQKENVQLLLCGDFNSLPDSGVIEFLSAGRVSSEHRDFKELGY
AGSLRRMPGSEHEFTHNFKLASAYSEDIMPYTNYTFDFKGIIDYIFYSKQSMTPLGLLGP
LSQDWFREHKVVGCPHPHIPSDHFPLLVELEMSPSTSGNSNGLIGRR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaacaaattgcgcacattgcctgctgagctgggagatctgatacaactaagg
gaattacacttacacaacaactacctgagggtactgccctacgacctcggcaagctgttc
cacctccagctcctggggctgcagggcaacccgctcagcaaggagatgctctccatctac
aacgacaacaacggcacctccaaactgctgacgtatctgctcgacaatatgcaagttact
gccacgttaccaccacagaggccttggatacccttgactcgaccgaataggagtcgaccg
acatgtatattcaccgtgatgtgctacaacgtgctgtgcgacaagtacgccacgcgacag
atgtacggctactgccccagctgggcgctggagtgggactacaggaaaaagggcatcctc
gacgagatcagacattactccgctgacatcattagcttacaggaagtagaaacggatcaa
ttctatgcattttttctgcccgagcttaagcaggacggttatgatggcatattttcgccc
aaatctcgcgcaaagactatgtctgaatcggaacgaaagtacgtcgatggatgcgcaatt
ttctttagaacttcaaaattcacactagtaaaggaacacctaatcgaatttaaccaacta
gcaatggcgaacagtgaaggttcggacaatatgttgaatcgagttatgccgaaggacaac
attggtttggctgcgttattaaaaacaaaggatgcagcgtgggataacgcgtttaacgac
atatccggaatacccaccgatccatccaccctagcacagccgatactagtttgcacggcg
cacatacactgggaccctgagttttgcgacgtgaagttgatccagaccatgatgctgagc
aacgaacttcgctctatactggacgactcggcgagaacgctacgtttgtcgggacagaag
gaaaatgttcaactactgctatgcggggatttcaactcacttccagacagcggcgtgatt
gagttcttgtcagcgggtcgagtatcttcagagcaccgggacttcaaggagctgggctat
gcgggctcgctgcgtcgcatgccgggctccgagcacgagttcacgcacaacttcaagctg
gcctccgcgtacagcgaggacatcatgccctacactaactacacattcgacttcaaaggc
atcatcgactacatcttctacagcaagcagtcgatgacgccgctggggctgctgggcccg
ctgtcgcaggactggttccgcgagcacaaggtcgtcggctgtccgcacccgcacataccc
tcagaccacttcccgctgctagtagaattggaaatgtccccgagcacgagcggcaacagc
aacggcctgatcgggcgcaggtag
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