Bicyclus anynana (squinting bush brown): 112050704
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Entry
112050704 CDS
T07476
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03013
Nucleocytoplasmic transport
bany03015
mRNA surveillance pathway
bany03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112050704
09122 Translation
03013 Nucleocytoplasmic transport
112050704
03015 mRNA surveillance pathway
112050704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112050704
03041 Spliceosome [BR:
bany03041
]
112050704
Enzymes [BR:
bany01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112050704
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112050704
Spliceosome [BR:
bany03041
]
Complex C
Other components
EJC/TREX
112050704
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112050704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112050704
NCBI-ProteinID:
XP_023944798
UniProt:
A0A6J1NIN6
LinkDB
All DBs
Position
8:17591396..17593153
Genome browser
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVA
LAQLLTDQNFPAIGIHRNMTQDERLTRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacgacgatcttctcgattacgaagatgaagaacaagcagatcaacagacc
gccgacggagcgaccgaagcggcgccaaaaaaagaggttaaaggatcttatgtatcaatc
cacagttcgggcttcagggatttccttttaaaacctgaaattctgcgtgccatagtcgac
tgcggtttcgagcatccgtcggaagtgcagcacgaatgcattccgcaggccgtactcggc
atggatatcctgtgtcaagcgaagtccggcatgggcaagactgccgtgttcgtgttggcc
accctgcagcagctcgagccgtcggagaatcacgtgtacgtgctggtgatgtgccacacc
agggagctggccttccagatcagcaaagagtacgagcgcttctccaagtacatgtccggc
gtccgggtgtccgtgttcttcggcgggatgcccatacagaaggacgaggaggtgctcaag
acggcatgcccgcacatcgtcgtgggcacgccgggccgcatcctggcgctcgtcaacagc
aagaagctgaacctgaagcacctgaagcatttcatcctggacgagtgtgacaagatgttg
gagtcgctggacatgcggcgcgacgtgcaggagatcttccgcaacacgccgcacggcaaa
caggtcatgatgttctcggccacgctgagcaaggagatccgccccgtgtgcaagaagttc
atgcaggaccccatggaggtgtacgtggacgacgaggccaagctcaccttgcacggcctg
cagcagcattacgtaaagctcaaagagaacgagaagaacaagaagctgtttgaactgttg
gatgtcttagaatttaaccaagtagtgatattcgttaaatctgtacaaagatgcgtagct
ctcgcacaactcctcacagatcagaatttcccagccatcggtattcacaggaacatgact
caggacgagaggctgactcgctatcaacagttcaaggatttccagaagagaatactagta
gccaccaacttgtttggaagaggaatggacattgaaagagtaaatattgtctttaactat
gacatgcctgaagattcagacacttatctgcacagagtggcccgagctggcagatttggt
accaaaggcttagcgataaccatggtctctgatgagaatgatgccaaaattttaaacgaa
gtccaggaccgctttgatgtcaatataactgagttacctgaagaaattgaattatcaact
tacatagaagggcgataa
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