Bicyclus anynana (squinting bush brown): 112050876
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Entry
112050876 CDS
T07476
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112050876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bany03021
]
112050876
03019 Messenger RNA biogenesis [BR:
bany03019
]
112050876
Transcription machinery [BR:
bany03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112050876
RNA polymerase I system
112050876
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
112050876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW
KOW4_SPT5
Spt5-NGN
KOW7_SPT5
KOW2_Spt5
KOWx_SPT5
KOW5_SPT5
KOW6_SPT5
Spt5_N
GPKOW_C
CTD
DUF3912
TIGD5_C
DUF3984
Motif
Other DBs
NCBI-GeneID:
112050876
NCBI-ProteinID:
XP_023945031
UniProt:
A0A6J1NPB6
LinkDB
All DBs
Position
3:771397..780261
Genome browser
AA seq
1081 aa
AA seq
DB search
MSDSEGSVYSGSGSDAGSVASNRSRRSAGSNRSNRSNRSVRSGSRSRSRSQSGSRGSRSR
SPSKSPSRSRSPSRSRSRSPSKSRSRSRSRSQSVASDASRTNGKDDEAKEASGDEEVEDE
QEPEGEELVDSEEYDEDEEEERRRKKRKKDSRYGGFIIDEAEVDDEVDEDDEWEEGAQEM
GIVGNEVDEIGPTAREIEGRRRGTNLWDSQKEEEIEEYLRNKYADESAALRHFGEGGEEM
SDEITQQTLLPGIKDPNLWMVKCRIGEEKATVLLLMRKFITYQNSEQPFQIKSVVAPEGV
KGYIYIEAYKQTHVKSIIENVGNLRMGIWKQEMVPIKEMTDVLRVVKEQSGLKPKQWVRL
KRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRLRGALRTVQSESEAAKRKKKRRPAAK
PFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTMSAILAEGVKPTLTELERFEE
QPEGIDIELAAPAKDDPTSLHSFSMGDNVEVCSGDLANLQARIIAIDGSMITVMPKHDAL
KDALVFKPNELRKYFKQGDHVKVLAGRYEGDTGLIVRVEPHRVVLVSDLTMHELEVLPRD
LQLCSDMATGVDSLGQFQWGDMVQLDPQTVGVIVRLEKENFHVLGMQGKVIECKPQALQK
RRENRFTMALDSEQNTIQKKDIVKVIDGPHAGREGEIKHLYRNFAFLQSRMYLDNGGIFV
CKTRHLQLAGGAKNAAAANGLALGFMSPRIQSPAHPSARGGARGRGRGARGGAAARDRDF
IGQTIKITGGPYKGNVGIVRDANVSTARIELHTACQTISVDRGHIAAAGGAGAARGGASA
YGRTPTARAGAHTPTYRDAGFKTPLQGVATPVYEAGSRTPHYGASTPAHDGGRTPAHPAW
DAAAHTPRPDPDLALGSPAYDAPYAQGPFTPQTPGTMYGSDHTYSPYRPSPGYSGSPSPA
PYSPRSPGADEDADWPAPELEVRVRADAEPALRGQVGALRGVSGASCSVLLAHEDRVVTV
PAHLLEPVLPQSGDRVKVIAGEDREAVGQLISIENQEGLVKFGTDDIKIMQLRHLCKMAA
T
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcagagggcagcgtgtattccggcagcggctctgacgctggcagtgttgca
tcgaatcgctcgagacgaagcgctggttcgaaccgctcgaaccgatcgaaccgctcggtc
aggtcgggctcccgttctcggtcccgttcgcagtctggtagtcgcggcagccggagccga
agcccctcaaagtcaccctctaggtcacggtccccatctcgatcgcgatcgcgatctcca
tcgaaatctcggtcgcgatctcgttcaaggagccagtctgttgcatctgacgccagtcgc
accaatgggaaggatgacgaagcaaaggaagcctccggggatgaagaagttgaggacgaa
caggagccagaaggtgaagagctagtggactctgaggagtatgatgaagatgaagaagag
gaacgcagaagaaagaagcgcaagaaagacagccgctatggaggctttattattgacgaa
gctgaggttgatgatgaagttgacgaagatgacgaatgggaagaaggtgcccaggagatg
ggtattgtgggcaatgaggttgatgaaattggtcctacggcgcgagaaattgagggtcgc
cgaagaggtactaacttgtgggactcgcagaaagaagaagagattgaggagtacctcaga
aataagtatgcagatgaatctgctgcactgaggcatttcggagagggtggggaggaaatg
tcggatgaaatcacccaacagactctcctcccaggcataaaagaccccaatctgtggatg
gtcaagtgcagaatcggagaagagaaagccactgtgctgcttcttatgagaaagttcatc
acttaccagaattctgagcaaccttttcaaatcaaatccgtagtagcgccggaaggagtg
aaaggctacatctacatcgaagcctacaaacagacacacgtcaagagcattatagagaac
gttgggaatttaagaatgggaatttggaaacaagaaatggtgcctattaaagaaatgaca
gacgttttgagggtcgtcaaagaacaatcaggcttgaaaccgaagcagtgggtcagatta
aaaaggggtctctacaaagatgacatcgcccaagtcgactacgtggacttggcccaaaac
caagtgcatctgaagttgttaccgagaatcgattacacgagactgagaggggctttgaga
accgtccagagcgagagcgaggccgccaaacggaaaaagaagcgcaggccggcggccaaa
cccttcgaccctgaagcgatcagagccatcggcggggaagtcacttctgacggcgacttc
ttaattttcgagggtaacagatactcgagaaagggtttcctgtacaaaaactttacgatg
tcggccattttagccgaaggagtgaagcccactctgacggagttggagaggttcgaggag
cagcccgaggggatcgacatcgagctggccgcgcccgccaaggacgacccgacgagttta
cactccttctcgatgggagacaacgtcgaggtctgttccggcgatctggcgaacctgcag
gcgaggatcatcgccatagacggctccatgatcacggtgatgccgaagcacgacgcgctg
aaggacgcgctcgtgttcaaaccgaacgaattgcgaaagtacttcaagcaaggcgaccac
gtcaaggtgctggcgggccggtacgagggcgacaccggcctcatcgtgcgcgtggagccg
caccgcgtcgtgctggtgtccgacctcaccatgcacgagctggaggtgctgccgcgggac
ctgcagctgtgctccgacatggccaccggcgtggactcgctggggcagttccagtggggc
gacatggtgcagctggatccgcagacggtcggcgtcatcgtgcgcctggagaaggagaac
ttccacgtgctcggcatgcaggggaaggtcatcgagtgcaagcctcaagcgctgcagaag
cggcgcgagaaccgcttcacgatggcgctggactccgagcagaacaccatccagaagaag
gacatagtgaaggtgatcgacgggccgcacgcgggccgcgagggcgagatcaagcacctg
taccggaacttcgccttcctgcagtcgaggatgtacctggacaacggcggcatattcgtg
tgcaagacgcgccacctgcagctggcaggcggcgccaagaacgccgccgccgccaacggg
ctggcgctgggcttcatgtcgccgcgcatccagtcgcccgcgcacccgtcggcgcgcggc
ggcgcgcggggccgcgggcggggcgcgcggggcggcgccgcggcgcgcgaccgcgacttc
atcgggcagaccatcaagatcacgggcggcccctacaagggcaacgtgggcatcgtgcgc
gacgccaacgtgagcacggcgcgcatcgagctgcacacggcgtgccagaccatctccgtg
gaccgcggccacatcgcggcggcgggcggcgcgggcgcggcgcgcggcggcgcctcggcc
tacgggcgcacgcccacggcgcgcgcgggcgcgcacacgcccacgtaccgcgacgcgggc
ttcaagacgccgctgcagggcgtggccacgcccgtgtacgaggcgggcagccgcacgccg
cactacggcgccagcacgccggcgcacgacggcgggcgcacgccggcgcaccccgcgtgg
gacgccgcggcgcacacgccgcgccccgaccccgatttggcgctgggctcgcccgcctac
gacgcgccgtacgcgcagggcccgttcacgccgcagacgccgggcaccatgtacggctcg
gaccacacgtacagcccgtaccggcccagccccggctactcgggctcgccgtcgccggcg
ccctactcgccgcgctcgcccggcgccgacgaggacgccgactggccggcgcccgagctg
gaggtgcgcgtgcgcgccgacgccgagccggcgctgcgcgggcaggtgggcgcgctgcgc
ggcgtgtcgggcgccagctgcagcgtgctgctggcgcacgaggaccgcgtggtgacggtg
ccggcgcacctgctggagcccgtgctgccgcagagcggcgaccgcgtcaaggtgatagcg
ggcgaggaccgcgaggcggtggggcagctcatctccatcgagaaccaggaggggctcgtc
aagttcggcaccgacgacatcaagatcatgcaactgcgacacctgtgcaagatggcggcc
acctag
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