Bicyclus anynana (squinting bush brown): 112052509
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Entry
112052509 CDS
T07476
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112052509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112052509
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112052509
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
112052509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112052509
NCBI-ProteinID:
XP_023947388
EnsemblRapid:
LOC112052509
UniProt:
A0A6J1NR84
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All DBs
Position
1:6529191..6533196
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AA seq
310 aa
AA seq
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MAGILLSHTEKVYITHGVKNEYRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV
GVKTEIDVPKPDKPGLGKIEFFVDCSANATPEFEGRGGEQLANSISNIMLRAYQSAQAFN
LKQLCIFEGKQCWKLYIDILILECGGNLCDAVSLAVKAALFNTRIPFVKAALMDGGNVDL
QLSDDPFDSKWLDVGSAPLLVTLCRIGEKCVVDPTAEEESCSLVSLIVGVTGNPKYYNDY
EDEEELPAFEAKCSVISMHGPGSVSPQNLRDAINQGIIAAVCLDEALGKTLFRERRDTEQ
FKRHSYGFLK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctggtattttattgagccatacagaaaaagtttatattacacacggcgttaagaat
gaataccggtcagatgggaggtcaaacatcgactacaggccaatggaactggagacagat
gtggttagccatgcaagtggctcagcgaggctcaggcttgcaaatacagacattttggtt
ggtgtcaaaacagaaatagatgttcccaagcctgataaaccggggttaggcaagattgaa
ttttttgttgattgttcagcaaatgcaacaccagagtttgagggccgtggtggagagcaa
cttgctaacagcatatccaatataatgctgagagcataccagtcagcacaagctttcaat
ctaaaacagttatgtatatttgaagggaaacagtgttggaaactctacattgacatactg
attctagaatgtggtggaaacctgtgtgatgcagtgtcacttgcagtaaaagctgctctt
tttaacactagaataccatttgttaaagcagcgctcatggatggtggcaatgtagacttg
caattatcagatgatccatttgacagcaaatggttggatgttggatctgcaccacttttg
gtaacattgtgcaggataggtgagaagtgtgttgtagatccgactgcagaggaggaaagt
tgtagtttggtatcgctcattgttggagttacgggaaaccctaaatattacaatgactat
gaagatgaagaggaactacctgcttttgaagccaaatgcagtgtgattagcatgcatggc
cccggcagtgtctcaccacaaaatttgagagatgccataaatcagggaataattgcagct
gtgtgtttagatgaagctttaggaaaaactctattccgggagaggcgagacactgaacaa
tttaaaagacattcatatggatttttaaaatga
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