Bicyclus anynana (squinting bush brown): 112053362
Help
Entry
112053362 CDS
T07476
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany04382
Cornified envelope formation
bany04512
ECM-receptor interaction
bany04518
Integrin signaling
bany04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112053362
04518 Integrin signaling
112053362
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112053362
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112053362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bany04147
]
112053362
00536 Glycosaminoglycan binding proteins [BR:
bany00536
]
112053362
Exosome [BR:
bany04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112053362
Glycosaminoglycan binding proteins [BR:
bany00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112053362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112053362
NCBI-ProteinID:
XP_023948527
UniProt:
A0A6J1NTP8
LinkDB
All DBs
Position
3:complement(10257366..10287108)
Genome browser
AA seq
1812 aa
AA seq
DB search
MAVHVLWLVAALVSISEVSPQQDDYGRSDWMSQSEYDPTVDENPFYGLSRRPDYPISPPP
SQPPPPRQPPSFGQNFAVYDPETRRRTTAFDRNCTAPGCCVPKCFAEKGNRGRPGSPGPQ
GLRGLPGHEGAEGPQGSKGQKGQVGPQGPRGPKGERGKPGAQGYSGLIGPPGAQGEPGFP
GIPGRDGCNGTDGEPGLIGPKGSQGPRGIPGLKGDRGDKGEPAHIGRFSKGQKGEPGADG
MQGPQGPVGPTGPAGLPGPKGNTGPLGPFGPKGDKGAKGSSGQSVQGDKGDRGDKGDRGL
ACPTRTLPSTDSKGAIKGIQGDAGPKGDKGEPGRMGEKGDTGPMGEPGLAGQMGIKGEKG
IRGNPGERGRDGMYGATGPMGQKGDRGEVGLAGLPGRPGLKGEPGRDGAPGHQGLKGVPG
PPGGRAGSRGPPGPLGPRGYPGPAGPPGSDGRPGEGGPQGPMGQRGGQGEPGTPGIEGPA
GPKGEKGEPGLNGLPGEVGVKGYDGPTGPQGPRGPKGEDGFSIPGDKGNSGEPGIPGHPG
QKGERGYQGLRGVPGNSTLGTPGMPGEMGPEGEKGEKGNPGFDGMPGSTGPKGDIGGRCN
ECWPGSPGAKGDRGSDGLPGERGERGPQGPVGLRGERGSDGLNGLPGSAGPPGDRGDEGP
MGPEGERGENAIIPSNLIKGPPGERGAPGEKGQMGPKGEKGLFGPPGDRGLHGMPGQKGD
MGRMGPPGLDGTPGANGTPGKPGTKGISVKGEKGEIGDFGQKGDKGFEGKPGLKGEPGRC
PQEIRALTKGDKGNPGAVGPQGPIGVPGEKGEPGQMGRTGEKGHMGVPGSQGQVGPRGPP
GLKGDKGDLGSMGFPGTPGTTGPRGYPGIPGQRGDKGEIGPSMPGPPGPAGLKGDKGLPG
SRGIPGIPGSDGTVGPAGLIGEKGEMGFVGLRGIPGAPGQKGEAGPIGPHGMPGSPGIPG
TPGQKGQQGFQGLTGKPGVIGLPGFKGEPGMQGPDGPKGFPGPRGSPGLVGSPGLEGSPG
EKGEKGERGYPGQPGERGFDGPMGPPGLPGEKGDRGFHGPPGLRGRDGSPGPKGNMGLTG
ERGQKGEAGSIGEKGERGERGLDGLRGLDGLPGASGEKGDKGDIGQPGYGLPGAPGLKGD
AGLPGIDGIKGNIGPKGDNGLPGPSGQKGEIGIQGNSGPPGRPGLDGFPGRPGEKGLPGL
EGDKGERGDRGIPGRDGLDGLKGERGTQGPPGLLGPTGFTGDKGDRGLPGLSMNIKGERG
DIGPPGIPGLQGEKGDKGDEGLQGLQGQKGDRGFVGPKGEIGRTGQEGSKGDRGPAGPGG
IPGLTIKGEKGLPGLSGKHGHPGLPGDRGEKGDKGFIGLPGQTGRPGIPGSPGTRGEKGD
TGREGIAGPPGFDGSPGAPGQPGIMGLTGEKGDKGATGYGLPGSKGEPGPSGITGAPGQK
GDKGNRGFDGITGQPGQKGQQGEKGDQGYPGRVGIPGFSGEKGDKGEAAAIIYGSKGEPG
PRGPPGLNGLPGRDGSPGARGLDGKPGQRGDPGLPGPRGPPGSPGPQGLRGLQGERGDIG
LTGIQGLPGSPGAPCTNTDYLTGILLVRHSQTEIIPQCEPGHVKLWDGYSLLYIDGDEKA
HNQDLGHAGSCVKQFSTMPFLFCDLNNVCHYASRNDRSYWLSTNQPVLMMPVEGKEIAPY
ISRCVVCEVPANVIAVHSQTLDIPSCAPGWSSLWIGYSFVMHIGAGGQGGGQALASPGSC
LEDFRATPFIECNGEGGSCHHFTNGLSFWLTTIEEDKQFKMPERETLKAGSLLQRVSRCA
VCIKNTDSSRGY
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccacgtactttggttggtggctgctttggtgtctataagtgaagtgagtccg
caacaagatgattacggacggtcggactggatgtcacagagtgaatatgacccaactgta
gatgaaaatcccttttacggcttgtcgagaaggcccgactaccctatatcgccgccaccg
tcgcaaccaccgccgccgcggcagcccccgagttttggtcagaacttcgccgtctacgat
cctgagacgagacggcggacgacggcgttcgatcgcaactgcacagcaccaggttgttgc
gtgcctaaatgctttgccgagaagggtaaccgaggacgtcctggctcgcctggaccgcag
gggctgcgaggtcttccgggacatgaaggagcagaagggcctcaaggttccaaaggtcag
aaaggtcaagtgggtccacaaggcccaaggggtccaaaaggcgaacgaggaaaaccggga
gcacaaggttatagtggattaataggccccccgggtgcgcaaggagaaccaggttttcct
ggaatacctggtagagacggatgtaacggaacggatggagaacctggtttaattgggccc
aagggatcacaaggtccacgcggaattcctggactgaagggtgacagaggtgacaaaggc
gagccagctcatataggacgattttcaaaaggacaaaaaggagaaccaggagctgatggt
atgcaaggtccacaaggtccggttggtccaactgggcctgcaggactacctggaccgaaa
ggaaacactggacctttgggtccattcggtcctaaaggtgataaaggagctaaaggatct
agcggtcaatcagttcagggcgacaaaggtgatagaggagacaagggtgatcgtggccta
gcttgtccaacaaggaccttgccttctacagatagtaagggtgctattaaaggaattcaa
ggagatgcgggtcctaaaggtgacaaaggtgaaccaggtagaatgggtgaaaagggagat
accggaccgatgggagagcctggtttagctggacaaatgggtattaaaggagaaaaaggc
attagaggaaacccaggagaaagaggccgagatggaatgtatggcgccactggacctatg
ggtcaaaaaggagacagaggagaagttggcttggctggtctacctggaagacccggactt
aaaggagaacctggaagagatggagcacctggtcatcaaggcctaaaaggtgtgcctgga
cctcctggtggtcgagcaggatctcgtggacctcctggacctttaggaccaagaggttac
ccaggccctgctggtccaccaggatcagatggaaggcctggagagggaggaccacaaggg
ccaatgggacaacgaggaggtcaaggtgaacctggtacaccaggtattgaaggtcctgca
ggtcctaaaggagaaaagggagaacctggtcttaacgggttacctggtgaagtgggagtg
aaaggttacgatgggcctactgggccccaaggaccaaggggacctaaaggggaggatggt
ttttcaatacctggagataaaggaaacagtggggagccaggcatcccaggtcatccaggt
cagaagggtgaaagaggatatcaagggttacgcggtgttcctggaaattctacgttagga
acacctggaatgcctggtgaaatgggaccagaaggagaaaagggtgaaaaaggaaatcct
ggcttcgacggtatgcctggttctactggcccgaaaggagatattggtgggcgttgtaat
gaatgttggcccggttcccctggagcaaagggtgatcgtggttcagacggccttcctgga
gaacgtggagaacgtggacctcaaggcccggttggattacgtggggaaagaggatctgat
ggccttaatggtctgcctggatcggctggtccaccgggtgatcgaggcgatgagggacca
atgggaccagaaggagaaagaggagaaaacgctattattccatcgaatttaataaaggga
cctccaggagaaagaggtgcacctggtgaaaaaggtcaaatgggtcctaaaggagaaaaa
ggtctttttggtccacctggtgatcgtggtctacatggtatgcccggacagaaaggcgat
atgggaagaatgggaccacctggtttagatggtacgccaggagctaatggtacacctggt
aaaccaggaacaaaaggaatttcagtaaaaggtgaaaagggtgaaataggtgattttgga
cagaaaggtgacaaaggatttgaagggaaacccggtctaaaaggtgaacctggtagatgc
cctcaagaaataagagctctaactaaaggagataaaggaaatcctggagcagttggccct
caaggacctattggtgtacccggtgaaaagggtgaacccggtcaaatgggccgaactgga
gaaaagggacatatgggagtgcctggatcacaaggacaagttggaccaagaggtccacct
ggtcttaaaggtgataaaggagatttagggtcaatgggtttccctggtactcctggtact
acagggccaagaggctatccaggaatacctggtcaaagaggtgataaaggtgaaatcgga
ccatctatgccgggaccaccaggacctgctggattaaaaggtgacaaaggattacctgga
agtagaggaatacctggaattccagggagtgacggaactgtcgggcctgcaggattaatc
ggagaaaagggagagatgggctttgtaggactgcgtggaattcctggggctccaggtcaa
aaaggagaagcaggtccaattggtccccatggaatgccaggttcacctggtatacctggt
acacctggacagaaaggacaacaaggttttcaaggattaactgggaaaccaggagttatt
gggttacccggatttaaaggtgaaccagggatgcaagggccggatggtccaaaaggattc
ccaggacctcgtggaagtcctggattagtaggatcgcctggactggagggaagcccgggt
gaaaaaggggaaaagggtgagagaggatatccaggacaacctggtgaacgtggttttgat
ggtcctatgggaccgcctggtttgcctggagaaaaaggtgatagaggtttccatgggcca
cctggtctacgtggcagagatggttcaccaggacctaaaggaaatatgggtctaacaggt
gaaagaggacaaaaaggagaagctggttcaataggtgaaaagggtgaaagaggagagcgt
ggtctggatggcttaagagggttggatggcttacccggtgcatctggggaaaaaggcgat
aaaggtgacattggtcaaccaggatacgggttgcctggagctcctggtcttaagggtgat
gcgggtctacctggtatcgatggaatcaagggcaacataggacccaaaggcgataatggc
ttacctggaccttccggacaaaaaggtgaaataggaattcaagggaacagtggcccacca
ggtcgaccagggttagatggatttccaggtcgccctggtgaaaaaggactgcctggactt
gaaggtgacaagggtgaacgaggcgacagaggtattcctgggcgtgatggcttagatgga
ttaaaaggtgaacgtggaacacagggcccgccgggtttacttggccctacagggtttact
ggtgataaaggcgatcgaggcttgccaggtttatctatgaatattaaaggagaaagaggc
gacatcgggcctcctggtataccaggacttcaaggtgaaaagggtgacaagggtgatgaa
ggactgcaaggcttacaaggacaaaagggagatagaggttttgttggacctaaaggagaa
attggtagaactggtcaggaaggatcaaaaggtgatagaggtccagctggtcctggaggc
ataccgggtctcactattaaaggcgaaaagggtttgcctggattatctggtaagcatggc
cacccaggtttaccaggcgatcgtggagaaaaaggagataaaggttttattggacttccg
ggacagacaggacgaccaggtataccagggtcacctggaacacgaggagaaaaaggagat
acaggacgtgaaggaattgcgggaccaccaggttttgatggaagtccaggagctccggga
caaccgggtataatgggactaactggtgaaaagggtgataaaggagcaaccggttatggt
ttacctgggtccaaaggagaaccaggtccttcaggtattactggtgcaccaggacaaaaa
ggtgacaaaggaaatcgtggctttgatggtataacaggacaaccgggtcaaaagggtcaa
caaggtgaaaaaggagatcaaggttacccaggacgtgtaggtataccaggatttagcggc
gaaaaaggtgacaaaggtgaagcggctgctattatttacggttcaaaaggagagccagga
cctcggggtccccctggattaaacggacttcctggacgtgacggttctcctggtgctaga
ggtttagatggtaaaccagggcaacgaggtgatccagggctaccagggccgagaggtcct
cccggttcaccaggtccccaaggattacgaggtctgcaaggtgaaagaggcgatataggt
ctgactggcatacaaggtttaccaggatctccaggagcaccttgtactaatacagactac
cttacaggtattttattagttcggcatagccaaactgaaattataccacaatgcgaaccc
ggtcatgtcaagttgtgggacgggtactctcttctatacattgatggagacgaaaaagcg
cataatcaagacctgggccacgccggctcttgtgtaaaacaatttagcactatgcctttc
ttattctgtgatcttaataatgtatgccattatgctagtcgtaatgatcgcagttactgg
ttatcaactaaccaaccagtgcttatgatgccagtagaaggaaaagaaatcgcaccatac
atttcaagatgtgtcgtctgcgaagttccagctaacgtcattgcggtccacagtcaaact
cttgatataccaagttgtgcaccaggatggagttcgttatggattggatacagttttgtt
atgcacatcggagctggtggccaaggcggtggacaagcgttggctagccctggctcatgt
cttgaagatttccgggcaacgccattcatagagtgtaacggtgaaggtggaagttgtcat
cactttactaacggacttagtttctggctcactacaatagaagaggacaaacaattcaaa
atgcctgaacgtgaaactctcaaggctggcagtctcttgcagcgagtgtctcgatgtgca
gtgtgcattaaaaatacagatagttcccgtggatactaa
DBGET
integrated database retrieval system