Bicyclus anynana (squinting bush brown): 112056117
Help
Entry
112056117 CDS
T07476
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
bany
Bicyclus anynana (squinting bush brown)
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bany04131
]
112056117
Membrane trafficking [BR:
bany04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112056117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
cEGF
DUF5050
Vgb_lyase
Arylesterase
EGF_CA
EGF_LRP2
EGF
Adeno_E3_CR2
NeA_P2
LapA_dom
Motif
Other DBs
NCBI-GeneID:
112056117
NCBI-ProteinID:
XP_052737933
LinkDB
All DBs
Position
6:12814924..12845537
Genome browser
AA seq
1919 aa
AA seq
DB search
MEGYMSRAHAPYIMAANFARHFIILASFWICVYTDEHTSVGHPRPGNITADAPDTRSAVG
RVPPYQPPPGSGAIPVPGFRPHSPYTRVDSWHPNGRIHVNPKGSYVVADDDDVDVDDGSC
RIPCSEGFFSCQASCKCIPMEKRCDGKAECINSEDEAGCTPACDEHENRTICHSTSVCIA
LDWICDGDNDCGDFSDETHCGTSANCTSEQFQCANGLCIHKDWTCDGDNDCRDNSDETHC
PKGKCRDNQFTCGSGECLAHHWRCDKEADCPDNSDEDECPIDLLQCGENEIQCNNKKCIR
KDFKCDGDNDCGDWTDEDSCAILPGSCNSAEFKCSDGKCIPDRWRCDMERDCADADDESN
CDVHGMRNCTADEYVCADKRCVSKTWLCDGVRDCTNGEDEMDCQVFCEMDQYMCKSIHSD
AFRNCVNRKHVCDGMNDCPQGDDEEKCPTKRKCARDDKCEQKCITTFDGLPACSCHLGYV
LAEDGYSCKDIDECMYEQDPVCSQTCSNTQGSFYCGCMTGYVLRPDGRSCKAVGESPTLL
FSNRIGIRQVWLSGDNYMSIVKGLHNAVALDYHYEKKLVFWTENNMRVIRVTQIDSNNMS
DVIRWGLETPGGVAVDWIHDLLFWTDSGTRRVEVATLDGSQRAVLAASDVDKPRAIAVHP
GDALVFWTDWGPNPKIERANMDGNNRKSVIVDRIFWPNGLTIDYMDSKIYWADAKHHVIE
RATFDGRERKRITNKGLPHPFALTLFEDAIYWTDWHTKSISTVNKKTGMGIQTVHASLHV
PMDIRSFHPLRQLRTYKNRCGGNNGGCTHMCLPNSSGYTCRCPVGFNLNNDGRTCEQTPE
KLLLYARRKDIRLKQLNPRKQADSLDMVIPVENIKSAVALDWDHNSNSIFWTDVEKDSIN
KAYLNGSHQVVIVGSNLIAPAGLAYDWLTDKLYWTDAGTNRIEVANANGTMRTLLAWDKI
DKPRDIVLDPKGGVMYWSDWGSTPCIERADMDGGNRKRLIFGDMTWPNGLALDLPNNRIY
WTDGGNRTIEYANLDGTGRKVLIGEHLPHPFGLDLYGDEVFWTDWDTQSIQAANKYTGRN
RRTLGAGVEGLMDVRVFHKDRRGGVNRCSKNNGGCSHLCLLKPEGRSCACPIGIKLSKDG
KTCTNGPINYLIFAHRLDIRIVSLDVPYLVDVVLPMRSLKNALGVDVDQKTGLIYWTDTG
ERKIKRANKQGTENETIIGRGLHTADGIAIDSAGRKIYWTDGGRNSIEVAELNGKNRKVL
VWTGLDSPRAIALHYENGYMFWSDWGTSAKIERANMDGKSRRIIVENNIKWPNGLAIDRT
EGRLYWNDAKMYTIESSDFNGNDRRTLLNQVPYPYGIVIVGTHIYWTDWKTKALHRADKS
TGKDQITIRENLEGLMDIRAIQGDSVLENACGTNNGGCTHLCLRAPHGYSCACPTGLLFE
NETDPNPKICKQHPDNFLVFAARGNIALISLDTPEQWDTTLPIKDIQNSVAVDFHWEKKA
IFFTDVNNNEIRAINMENMSETKMIVNTGLDTPNGLGVDWIANNIYWTDNDFKVVEVARI
DGSSRKTLITNLTEPRALALFPAKGYLYWSDWGESPNIERAALDGSQRKIIVSHDLGFPN
GITIDYKDRRLYWTDALKDRIDTSDLNGQHRVQLVPEAKNPFGMTQFNEYIYWTDWYKKS
VMRADKRTGKNVTAIRTDLEMVMEIKAVSSEKQHGWNPCKEDNGGCSHLCLFRGHDYVCA
CPDAFDGRTCLTIPNIRVGLRMPSHYPPFYDYMDIEIGSPDTRQPTPTRAPKVIYGIGTI
AAVVSVLALLGLILIGFVCFLRRRNRQLRGEMKESYRDSTGHISFHNPNYSCTTTPGEPL
DRRPNRLGAFKYDKSQGRVTNVYVPEGTSLLPPPPPPPHRQPPRPANDDFEPVTLHPFA
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctatatgagcagagcccatgccccgtacatcatggcggcaaattttgccagg
cattttatcattctggctagtttttggatatgcgtttacactgacgagcatacatcggtg
ggacatccacgtccgggtaacattacggcggatgccccggacactcgctccgccgtaggc
cgcgtaccgccctaccagccgccgccaggctccggagccatacccgtgccaggctttaga
ccccacagcccttacacaagagttgattcttggcacccgaatggtcggatacacgtaaat
cccaagggatcttatgtggttgccgatgacgacgacgtagatgtggacgacgggagctgc
cgtataccgtgctccgagggattcttctcatgccaggcatcatgcaaatgcatcccaatg
gagaaacgctgcgacggcaaggcggagtgcataaactccgaagacgaagcaggctgcacg
cccgcctgcgacgagcacgagaaccgcaccatctgccacagcaccagcgtctgcatcgcg
ctcgactggatctgcgacggcgacaacgactgcggagacttctccgacgagactcattgt
ggtacatcagcgaactgcacatcggagcagttccaatgtgccaacggactgtgcatacac
aaagattggacatgcgacggcgacaacgactgtcgagacaactctgacgagacccactgt
cccaagggaaagtgtcgtgataaccaattcacatgtgggtctggggagtgcctggctcat
cactggcgatgtgacaaggaagccgactgtcctgacaactctgatgaggacgaatgcccg
atagatcttctacaatgcggtgagaatgaaatccaatgcaacaacaaaaagtgcatacgc
aaagatttcaaatgcgacggtgacaatgattgcggtgattggacggatgaggattcttgt
gccatactaccgggtagctgcaattctgctgagttcaagtgcagcgatggtaaatgcatc
cccgaccgttggcgctgtgacatggagcgagactgcgccgacgctgatgatgagagtaac
tgcgacgttcacggcatgaggaactgcaccgccgatgagtatgtttgcgctgacaaacga
tgcgtatcgaaaacctggctctgcgacggcgtccgtgactgtaccaacggtgaagacgaa
atggactgtcaagtgttttgcgagatggatcaatacatgtgcaagtcaatacacagcgat
gcgtttaggaactgtgtcaatagaaaacacgtgtgcgatggcatgaacgactgtcctcaa
ggggacgatgaagaaaaatgtcccactaaaaggaaatgtgcaagagatgacaaatgcgaa
caaaaatgtataactacatttgatggtttgcctgcttgctcttgtcatttgggttacgta
ttggctgaagatggttatagttgcaaagatatcgacgagtgtatgtacgaacaagatccg
gtatgttctcaaacttgttccaatacgcaaggcagcttctattgtggttgtatgacgggc
tatgtccttagacctgacggcagatcctgcaaggctgtgggagaatcacccacgctacta
ttttccaatcgcattggaatacgtcaggtttggcttagtggagacaactacatgtcaatt
gtgaagggtttgcataacgcagtggctttagactatcattatgagaagaagttggtattt
tggactgaaaataacatgagagtcattagagtaacgcaaattgatagcaacaacatgtca
gacgttatacgatggggcttagaaacaccaggcggtgtagcagtagattggatccatgat
ttacttttctggaccgattctggaactcgaagggtggaagtcgcaactttggatggatca
caaagggccgttctggcagccagtgatgtggataaaccaagagctattgctgttcaccct
ggtgacgctttggtattttggactgattggggtccgaatccaaagatcgagcgtgcaaat
atggatggaaataatcgaaagagcgtcattgttgatcgaatattttggcccaacggttta
actatcgactacatggactccaaaatatattgggctgatgctaagcaccacgtcattgaa
cgagcaacatttgatggacgcgaaagaaaaagaataacgaacaaagggctacctcatcca
ttcgctctgaccctatttgaggatgcaatatattggaccgactggcatacgaaaagcata
tccactgttaacaagaagactgggatgggtatacagactgttcacgcaagtctgcatgtt
ccaatggatattcgaagttttcatcctctacgtcaacttcgtacgtacaagaatcgttgc
ggtggtaataatggcggatgcactcacatgtgtttgcccaactccagtggatacacatgt
cggtgcccagttggattcaacctcaataatgatggacgaacgtgtgaacaaacacctgaa
aaattactgctttacgctcgacgcaaagatatcagattgaagcaactcaatccacggaag
caggcggattctttggatatggttataccagtagaaaacatcaaatcggctgtagcactc
gactgggatcacaacagcaactcaatattttggactgacgtagaaaaagacagcatcaat
aaagcttatttgaacggctcccatcaagttgttattgtaggatcaaatttaattgcacca
gctggtctggcgtatgattggctaactgataagttgtattggactgatgccggtaccaac
aggattgaggttgcaaacgctaacggcaccatgaggacattgctagcttgggataaaata
gataaaccgagggatattgtactggatcctaaaggtggtgttatgtactggtctgattgg
ggctctactccatgtatcgagcgtgctgatatggatggaggcaaccgcaagcgtctcatc
tttggtgatatgacatggcccaatggtcttgccctcgacttacccaataatcgtatctat
tggacggacggtggcaatcgcactatcgaatatgccaatctggatggtactggacgtaaa
gttttaataggtgaacatcttccacatccatttggactagacctttatggagacgaggta
ttttggacagactgggatacgcaatccatacaagcagcaaataagtatacgggacggaat
cggcgcactctaggcgccggtgttgaaggtctaatggacgtcagagtattccataaagat
agacgcggaggcgtaaacaggtgcagtaagaataatggtggatgctctcatctgtgcctt
ctaaaacctgaaggacgttcctgtgcttgtccaattggaataaaacttagcaaggatgga
aagacttgcacaaatggcccaataaactatttgatatttgcccatcgtttggatataaga
atagtgtcgcttgatgtaccatatctagttgatgttgtgttgccaatgcgatcgcttaag
aacgcactgggagtagacgtcgatcaaaaaacagggcttatttattggaccgacactgga
gagaggaaaattaaacgtgctaataaacagggtacagaaaatgaaaccattattggacga
ggcttacatacggccgatgggatagcaatcgactcagcaggaagaaaaatatattggact
gacggcggcagaaatagtattgaggttgcggaattaaacggcaagaatagaaaagtttta
gtatggacaggtttagactcgcccagagctattgctttgcactacgaaaatggctacatg
ttttggtctgattggggtacatcagccaagattgaaagagcgaacatggacggcaaaagc
agacgaatcattgtggaaaataacataaaatggcccaatggtcttgccattgatcgaacg
gagggtcgtctctattggaatgacgctaaaatgtataccatcgagagttctgattttaac
ggcaacgatcgtcgcacgctcctcaaccaagttccatatccatacggcattgttatagtg
ggtacacatatttattggactgattggaaaacgaaagctttacaccgagctgacaaatcc
actggaaaggatcaaataacgattagagaaaatctcgaaggtcttatggatattagagct
attcagggtgatagcgttctagaaaacgcatgtgggactaacaatggcgggtgtactcac
ctctgcctcagagcacctcatggatattcatgcgcatgccccaccgggttactgttcgag
aacgaaacagatccaaatccgaaaatctgcaaacaacatcctgataatttcctagtgttc
gccgctaggggaaacattgccctgatatctttagacacgcctgaacagtgggacacaaca
cttccaattaaagatatccaaaattctgtggcagtcgattttcattgggagaaaaaggcc
attttctttacagacgtaaacaataatgagataagagctataaatatggaaaatatgagc
gaaactaaaatgattgtcaatacaggacttgatactccaaatggtttaggtgtagattgg
attgcaaataatatatattggactgataacgattttaaggttgttgaagtagcgagaata
gacggctcgtcgagaaagacattgatcactaatttgactgagcctagagcacttgcattg
ttccctgctaaaggatatttatactggagcgactggggtgaaagtccaaacattgaacga
gctgctttagatggtagccaaaggaaaataatcgttagccacgatttaggtttccctaat
ggaatcacaatagactacaaagatcgaagactttactggactgacgctttaaaggataga
attgatacgtcggatttgaatggacaacatagagtgcaacttgttcctgaagccaaaaat
ccatttggaatgactcagtttaacgagtacatatattggacggattggtacaaaaagtcg
gtaatgcgtgccgacaagaggacgggcaaaaacgtgaccgcaatacgaacagacttagaa
atggtgatggaaataaaagctgtttcatcggagaagcaacacggctggaatccatgcaag
gaggacaatggaggatgctcacatctatgtctttttaggggacacgattacgtttgcgct
tgtcctgacgctttcgacggtagaacttgtttgaccattccaaacatacgcgtaggattg
agaatgccgtcacactatccaccgttctacgattacatggacattgaaatcgggagccca
gatactcgccaaccaactcccacacgtgctccgaaagtgatttacggcataggcaccatt
gccgcagtggtatcagtgcttgctctactcggcctcattttaattggtttcgtgtgtttt
ttgaggcgccgcaaccgccagttgaggggggagatgaaagagagctacagagattccacg
ggacatatttctttccacaatccaaactacagttgtacgaccactccaggcgaaccgtta
gacagacgtccaaaccgacttggagctttcaaatacgacaaaagtcagggacgagttaca
aacgtatacgtgccagaaggaacaagcctattgcccccgcccccgccgcccccccaccgc
caaccgccgagacctgcgaacgacgactttgaacccgtcaccctgcacccattcgcttga
DBGET
integrated database retrieval system
