Bicyclus anynana (squinting bush brown): 112058392
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Entry
112058392 CDS
T07476
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03030
DNA replication
bany03410
Base excision repair
bany03420
Nucleotide excision repair
bany03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112058392
03410 Base excision repair
112058392
03420 Nucleotide excision repair
112058392
03430 Mismatch repair
112058392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bany03032
]
112058392
03400 DNA repair and recombination proteins [BR:
bany03400
]
112058392
DNA replication proteins [BR:
bany03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112058392
DNA repair and recombination proteins [BR:
bany03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112058392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
Rad17
AAA_30
AAA_5
AAA_33
AAA_14
RuvB_N
RNA_helicase
AAA_16
AAA_17
RCF1-5-like_lid
AAA_19
NTPase_1
AAA_assoc_2
AAA_18
AAA_11
Motif
Other DBs
NCBI-GeneID:
112058392
NCBI-ProteinID:
XP_023954959
UniProt:
A0A6J1PAY6
LinkDB
All DBs
Position
4:3054893..3075439
Genome browser
AA seq
1101 aa
AA seq
DB search
MSKDIRSFFTVKKAKKKIEDEDSDVIPESPEVTIVNKKKQSKKRRQIQDDSDEEIFSPSK
KNKSESKPTLKEVKAVDIFGSTSIKRTEPLVKKSKKVTETGIHSDDEFEKSLLQIDEIDN
LVCPKSPKEDNCISKIDVMDKPNEKSQNNHDLKQNLSKKEKKSITQKNVLDLTDNDQKTS
DSKKIVPERSYFKDSVKKDKDSTTKKEINKNQNDDIVVDAKHQSKEHDLKQNCTSNGIKK
EKEPQPSQKRKLDKLHNETNSIKTETIKKEKADYSEFLKDDEKINHEDKPSEPKQKKVKL
DKSLNDSALTDEERHERKRYSAALYQKYLNRSGPKHLGSKEIPDGPPDCLKDCAFLLTGV
LDSFERDEVVAAITKYGGCVKNGISKKVTHVLAGDDAGPAKLAKAQELGIKILNEDEFLK
MIKHSDKKSSSTSKEIKKEDNIEKKISKRDKSKEKNTESRLGNNSNEKVKPKNDLKINDS
KLSLTNGTNKRERSISPKKFYKQATDKSDIKPDAVVNSDPQKSSNLTNNCSLMWVDKYKP
TSVKNIIGQNGEKSNVKKLSNWLTQWYVSRKAKIPKPSPWAKDDNGAYFKAALLSGPPGV
GKTTTVSLVCKELGFDMVEFNASDTRSKTLIREQIGELLTTTSLSAYARGATGKGAVTKK
HVLVMDEVDGMAGNEDRGGLQELISLIKSTSVPVICMCNDRNSEKMRSLVNYCYDLRFER
PRVNQIMCAMLSVCFKEGVKVPNEVLTQLIEAAGHDVRQTLHMLSVWAADATRMDGERLK
REAANVNKDMKMGPWEAIRRVFSAEDHRRMSIHDKSDLFFTDYSLMPLFVQENYLSVVPH
GPGKASLSKLETLDRLSRAADSISAGDLVDARIRRNQAWSLLPIQAMYSSVIPGQEMEGH
VAGQIQFPGWLGKNSRANKMRRLAQEIHAHTRLSTSGSKSSIYLDYSTHLRDAILTPLIR
DKTDGVEQSLKVLESYNLLREDLDSLVELSLWPEMRNPTVLIDPKVKAALTRTYNKTASA
LPYAPGAVKKGRGADNEDNSQEDEEQVEEDSDPEHDAMIKKKKTKETEKAGPSRASGKAK
KNAPSSPGKGKKGKTKTNNKR
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggacataaggtcattcttcactgttaaaaaagctaagaaaaagattgaagat
gaggacagtgacgtcatacccgagtctcctgaggtgacaattgtcaataagaaaaaacaa
tctaaaaaaagaaggcaaatccaagatgactctgatgaagagatattttcgccatcaaaa
aaaaataagagtgaatctaaacctactctaaaagaagttaaagctgttgacatatttgga
agtacatctatcaaaagaacagaaccattggttaagaaatccaaaaaagtaactgaaaca
ggtatacattcagatgacgaatttgagaagagtttattacaaattgatgaaattgacaat
ttagtgtgtcccaaatcacctaaagaagacaattgtatatctaaaatagatgttatggac
aaaccaaacgagaaatcacaaaacaatcatgatcttaaacagaatttaagtaaaaaagag
aagaaatcaatcactcaaaaaaatgtgttagatttaactgataatgatcaaaaaacatct
gatagcaagaaaatagtaccagagagatcctattttaaagacagtgttaaaaaagataaa
gactcaacaacaaagaaagaaattaacaagaatcaaaatgacgatattgtagttgatgca
aaacatcaatccaaagaacatgatttaaaacaaaactgcacaagtaatggtattaaaaaa
gaaaaagaacctcaaccttctcaaaagagaaaattagacaaacttcataatgaaacgaac
agtataaaaacggaaacaatcaagaaagagaaggcagattacagtgagtttcttaaagat
gacgaaaaaattaatcatgaagacaaaccaagtgaacctaaacaaaaaaaagttaaattg
gacaagagtcttaatgattctgctcttacagatgaagagagacatgaaagaaagaggtat
tctgctgctttgtatcaaaagtatttgaacaggtctggacccaagcatttgggatccaaa
gaaataccggatggtccaccagattgcttgaaggattgcgcgtttttacttaccggtgtg
ttggattcgtttgaacgcgacgaggttgttgcagctattactaagtatggagggtgtgtg
aaaaatggaattagtaagaaggtgacacacgtcctagcgggtgacgacgccggaccggca
aaattggccaaagcacaggaacttggcattaaaatcttaaacgaagacgaatttttgaaa
atgatcaaacattcagacaagaaaagttcatcgacttctaaagaaattaaaaaagaagat
aacattgaaaagaaaatttctaaaagggataaatcaaaggaaaagaatactgaatctcga
ttaggaaataatagtaatgaaaaagttaaacctaaaaatgacttgaaaataaatgacagt
aaattaagtttaacaaatggtacaaataaacgagaaagatctatatcaccaaagaaattt
tataaacaagcaacagataaatcggatattaaacctgatgcagttgttaatagtgatccc
cagaaatcgagtaatttaacaaacaactgcagtttgatgtgggtagataaatacaaacca
acgagcgtcaagaacattataggacaaaatggggagaaaagtaatgtcaaaaagttatca
aactggttgacccagtggtacgtgagcaggaaggcaaagatacccaaaccgagtccatgg
gcgaaggatgacaacggagcgtacttcaaagctgcattgttgtcaggcccgcctggagtg
ggtaaaacaacaactgtatccctggtgtgcaaggagctaggcttcgacatggtagagttc
aatgcatcagatacaaggagcaaaacactcatacgtgaacagatcggcgagctactcact
actacttcgctgtcggcatatgctagaggtgcaaccggaaaaggtgctgtaacgaagaaa
cacgtgctagtgatggacgaagtcgacggtatggcgggcaacgaggaccgcggtggtcta
caagagttgatatctctgatcaagtcaacatcagtgccagtgatctgcatgtgcaacgac
agaaacagcgagaaaatgcgctcgctcgtcaactactgctacgatctgcgcttcgagcgg
ccgcgcgtcaaccaaatcatgtgcgcgatgctgtcggtgtgcttcaaagagggcgtgaag
gtgccgaacgaggtgctgacgcagctgatcgaggcggccggccacgacgtgcgccagacg
ctgcacatgctgtccgtgtgggcggcggacgcgacgcgcatggacggggagcggctcaag
agagaggcggccaatgtcaacaaagatatgaagatgggtccgtgggaggcgatccgtcgc
gtgttcagcgcggaggatcaccggcgcatgagcatccacgacaagagcgacctgttcttc
accgactacagcctcatgccgctgttcgtgcaggagaactacttgagcgtcgtgcctcat
gggcctggcaaagcgagcctctcgaagctggagacgttggaccgtttgagtcgcgccgcc
gacagcatcagcgcgggcgatctggtggacgccaggatacggcgcaaccaggcctggagt
ctgctgcccattcaggccatgtacagcagcgtgataccggggcaagagatggaggggcac
gtggcggggcagatccagttcccgggctggctgggcaagaactcgcgcgctaacaagatg
cggcgtctggcgcaggagatacacgcgcacacccgcctcagtacatctggttcaaagtcg
tcgatatacctggactattcgacgcatcttcgcgacgctatcttgacaccgctgatacga
gacaagacagacggcgtagagcaatccttgaaagtgctagagtcgtacaacttgctgagg
gaagatctcgattcactcgtggagctctctctatggccggaaatgagaaatcccactgtt
ttgattgatcctaaggtaaaagcggctctaacccgtacatacaacaagacggcgagcgcg
ctgccgtacgcgccgggtgcggtgaagaaggggcgcggcgctgacaacgaagacaactct
caggaagacgaggaacaggtcgaggaggacagcgatcccgagcatgatgccatgataaag
aaaaagaagactaaagaaactgaaaaggcaggccctagcagagcatcaggaaaggcaaag
aaaaatgcaccatctagtccagggaaagggaaaaaaggaaaaaccaagacaaacaataag
agataa
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