KEGG   Bicyclus anynana (squinting bush brown): 112058461
Entry
112058461         CDS       T07476                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
bany  Bicyclus anynana (squinting bush brown)
Pathway
bany03030  DNA replication
bany03410  Base excision repair
bany03420  Nucleotide excision repair
bany03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bany00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112058461
   03410 Base excision repair
    112058461
   03420 Nucleotide excision repair
    112058461
   03430 Mismatch repair
    112058461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bany03032]
    112058461
   03036 Chromosome and associated proteins [BR:bany03036]
    112058461
   03400 DNA repair and recombination proteins [BR:bany03400]
    112058461
DNA replication proteins [BR:bany03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    112058461
  DNA Replication Termination Factors
   ELG1-RFC complex
    112058461
Chromosome and associated proteins [BR:bany03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    112058461
DNA repair and recombination proteins [BR:bany03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     112058461
  Check point factors
   HRAD17(Rad24)-RFC complex
    112058461
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_30 AAA_22 AAA_24 Mg_chelatase RuvB_N AAA_11 Rad17 Gp44_lid bpMoxR SLFN-g3_helicase AAA_assoc_2 AAA_19 AAA_3 Effector_1 TRI4_N AAA_5 DUF815 ATPase_2 AAA_25 AAA_7 DUF3373
Other DBs
NCBI-GeneID: 112058461
NCBI-ProteinID: XP_023955082
UniProt: A0A6J1PB42
LinkDB
Position
4:complement(5654378..5662248)
AA seq 350 aa
MQAFLKTGKISSADKPSSSGVKPSKKKPPAPWVEKYRPKTIDDIVDQGEVIQVLRECLAG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFAQL
TVSSTRPDGRPCPPYKLVILDEADSMTTAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLQDVCVAEGVDVGDGEVLHQAVDTCEGDMRRALTALQCC
QRLLGKITSEGLIEVTGLVPDKLINEFLSIKNYNELEKYVENFLMEAYSASQLLEQLSAT
VVNSGHLTNKQKCVISEKVAVCSHRLLDGGAEVMQLTDLGCTIIMANNNP
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcaagcgttcttgaaaactggaaaaatatccagcgctgataagccatcctcgtcaggt
gttaaacctagcaagaaaaaacctcccgcgccttgggtagaaaaataccgtccaaaaaca
atagatgacatcgttgaccaaggtgaggttattcaagtgctcagagaatgtttggccgga
ggagatctcccgcatttgttgttttatgggccaccagggactggcaagacgagcgccatt
ctcgcagcggctaggcaactcttcggagatattacaagagatcgtgtattagagctaaat
gcctctgacgaaagaggcatacaagtcatccgcgacaaagtgaaatcgttcgcacaattg
actgttagcagcaccagacctgatggcagaccttgccctccatacaaattagtgatactt
gatgaggcagattcaatgactacagcggctcaagcagcattgcgtcgcactatggaaaga
gagactcgtacaacacgcttttgtctcatttgcaattatgtgtccagaattattccacct
atcaccagtcgatgctccaagttcagattcaagccgttggctagagagaatgtcattaaa
aggttacaagacgtgtgtgtagctgagggggtggatgtaggggatggagaagttctccat
caggctgttgatacatgcgaaggagacatgcgccgagcactcactgctttgcagtgttgc
cagcgactgcttgggaaaataacttcggaagggttgattgaggtaacaggcctagttccc
gataaactgatcaatgagttcctcagcatcaagaactacaatgaactagaaaagtatgtt
gaaaatttcctcatggaggcctactccgcatcacaactcctagagcagctaagcgcgacc
gtggtcaacagtggccacttgaccaataaacagaaatgtgtcatcagcgagaaggtagcc
gtctgttcccatagactcctagacggaggcgcggaggttatgcagcttactgacctcggc
tgtactattattatggcgaataataatccatga

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