Bicyclus anynana (squinting bush brown): 112058617
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Entry
112058617 CDS
T07476
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112058617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112058617
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112058617
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
RB_A
Motif
Other DBs
NCBI-GeneID:
112058617
NCBI-ProteinID:
XP_023955293
UniProt:
A0A6J1PCC3
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Position
8:complement(4027955..4047528)
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AA seq
725 aa
AA seq
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MTADESAEIDWGNERLSRAQRAVEANVYDVDSWSLLIREAQTRPINEVRSMYEKLITAFP
TTGRYWKIYIEQEMKARNFEKVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYKEKM
AQAYDFALDKIGLDIHAYPIWNDYVTFLKAVDAVGSYAENQKISAVRKVYQRAVITPIIG
IETLWKDYIAFEQGINTIIAERMAMERSREYMNARRVAKELETVTRGLNRNMPATPPTVD
REEMKQVELWKKYITWERSNPLRSEDTALVARRVMFAIEQCLLCLAHHPDVWHQAAQFLD
HSAKLLQEKGDSNAVRLFSDEAAAVYERATSGPLKHSTLLHFAHADYEESRLHYNKVHQV
YTRYLDMEDIEPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRSLYHVFVAAALMEYYC
SKDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLKPESSV
DIWNRFLEFESNIGDLVSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFLDLYPCSIAE
LKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQKDNDPNKDIARPDTNQMIPYKPK
ANPLPGEHPISGGTFPIPPAAAHLCTLMPPPSSFRGPFVAVDRLMQLFNRISLPDKPPAP
TPENGCDTKLFDLARSVHWIVDDDGVSTTNKARRRKAGEDSDDDDLGVAPPVNDIYRQRQ
QKRVK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacgaaagtgccgaaattgactggggaaatgagaggttaagtcgcgctcag
cgtgcggtggaagcgaacgtctatgacgtagactcctggtctcttctgatcagagaagcg
caaacaaggccaataaatgaggtccggtctatgtacgagaagcttatcacagcattcccg
accacggggaggtactggaagatttacatagaacaggagatgaaagcaagaaactttgaa
aaagtagaaaagttgtttcagaggtgcctgatgaagatcctcaacatagagctgtggcgc
ctctacttgaattacgttaaggaaaccaaatgcatgttacccacatacaaagagaaaatg
gcacaggcttacgatttcgcactggacaaaattggcttagacatccacgcgtatccaata
tggaacgattacgtaacgtttttgaaggccgtagatgccgttggttcatatgctgagaat
caaaaaatatctgctgttagaaaggtatatcaacgagcagtcatcacacctataatcggt
attgaaacactgtggaaggattatatagcgtttgaacaaggcatcaatactattattgcg
gaacgcatggcgatggagcggtcgcgcgagtacatgaacgcgcggcgagtcgccaaggag
ctggagacggtgactcgaggactgaacagaaacatgccggccaccccgcccacagtcgac
cgggaggagatgaaacaggtggaactgtggaagaagtacataacatgggagcgatccaac
cccctgcgctcggaggacacggcgctggtggcgcggcgggtgatgttcgcgatagagcag
tgcctgctgtgcctcgcgcaccaccccgacgtgtggcatcaggccgcgcagttcctggac
cattccgctaaacttctgcaggaaaaaggggactcgaacgcagtgcggctgttctctgac
gaggcggcagcggtgtacgagcgcgcgaccagcggcccgctcaaacactccaccttgctg
cacttcgcgcacgccgactatgaggagagcaggctgcattataacaaggtgcaccaagtg
tacactcgctacctggacatggaggacatcgagccgacgctggcgtatgtgcagtatatg
aagtttgctcgccgcgccgagggaatcaagtcagcccggactgtgttcaaacgtgctaga
gaggatcctaggtctctgtaccacgtgttcgtggcagctgcactgatggagtactactgc
tccaaagataagaacatcgccttccgtatcttcgagctcggcctcaagaagttctcacac
atccctgaatatgtgctctgctacatcgactacttgtcacatctgaacgaggacaacaac
acacgcgtgctattcgagagggtgctatcgtccggcagtctgaagccggagagctcggtg
gacatctggaacaggttcctggagttcgagtccaacatcggggacttggtcagcatcgtc
aaggtggagaaacggaggcaggctgtgcttgaaaagatcaaagagttcgaaggcaaggag
acggcgcagctggtcgacagatacaagttcctggacctctacccgtgcagcattgctgag
ctcaagtctatcggctatactgaggtggcatcaatgtctaacaaatcgtgggccctcggc
ggtcctctcgctgggatatctccagaactagcagcagtcatcctgggacaaaaggataat
gacccaaacaaggatatagcgcgtcccgatacgaatcagatgataccttacaagccgaag
gccaacccactgccgggagagcaccctatatcaggcggcacgttcccgatcccgccggcc
gcggcgcacctgtgcacgctgatgccgccgccgagcagcttccgcggccccttcgtggcc
gtggaccgcctcatgcagctcttcaacaggatctcgctgcccgacaaaccgcccgccccg
acgcctgagaacggctgcgacaccaaactgttcgacctggcgcgctccgtgcactggatc
gtggacgacgatggagttagcaccacgaacaaggctcgtcgaagaaaagccggcgaagat
tccgacgatgatgatttaggagtggcgccccccgtcaacgacatatacaggcagagacaa
cagaagagagtcaagtga
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