Bacillus amyloliquefaciens DSM 7: BAMF_0004
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Entry
BAMF_0004 CDS
T01321
Symbol
recF
Name
(GenBank) DNA repair and genetic recombination factor
KO
K03629
DNA replication and repair protein RecF
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAMF_0004 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_0004 (recF)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BAMF_0004 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_27
DUF2813
AAA_21
AAA_29
ABC_ATPase
ABC_tran
AAA_13
Motif
Other DBs
NCBI-ProteinID:
CBI41130
UniProt:
A0A9P1JD63
LinkDB
All DBs
Position
3445..4557
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AA seq
370 aa
AA seq
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MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKEL
IRWDEDYAKIEGRVMKRNGDIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPED
LNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQRNHFLKQLQSRKQTDRTMLDV
LTDQLIEAAAKVVAKRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI
DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLHQAGM
FRVENGALVK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
ttgtatatccaaaatttagaattaacatcctaccgtaattatgagcgcgctgagcttcaa
ttcgaaaacaaggtgaatgtgatcatcggggaaaatgcccaaggcaaaaccaatctgatg
gaagccatctatgttctttcgatggcaaaatcgcaccgcacctcaaatgataaagaactt
atacggtgggacgaagactatgctaaaatagaaggaagagtgatgaagcgcaacggggac
atcccgatgcagctggtcatctccaaaaaaggtaaaaagggcaaagtcaatcatatagag
cagcaaaaactcagtcagtatgtcggagcgctgaacaccattatgtttgcccccgaggac
ttaaatctcgttaaaggcagccctcaggtgaggaggagatttcttgatatggagatcggg
caggtatctgccgtttatctgtatgatttatctctttatcaaaaaatcctttcccagcgg
aatcattttctgaaacagctgcaaagccggaaacagactgaccggaccatgcttgacgtt
ctcactgatcagctgattgaagcagccgcgaaagttgtcgccaaacgtctgcagtttacg
gcacagcttgaaaaatgggcgcagccgatccattccggcatttcccggggacttgaggaa
ctgacgcttaagtatcacacggcgcttgatgtatcagatcccaaagatttgtcgaaaata
ggtaacagctaccaggagtctttttcgaaattaaaagaaaaagaaatagaacgaggcgtc
acattattcgggccgcatcgggatgatgtccttttttatgtgaacggacgcgatgtgcag
acttacggttcgcagggacagcagcgtacgacggctttgtctttgaagctggccgaaata
gatttaattcatgaagaaatcggagaatatcccattttacttttggatgatgtactaagc
gagctggatgattaccgccagtcccatttgcttcatacaatccaaggccgtgtgcagaca
tttgtcaccacgacgagtgtggatggcattgaccacgaaaccttacatcaagcaggaatg
ttccgtgtggaaaacggtgcgttagtgaagtga
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