Bacillus amyloliquefaciens DSM 7: BAMF_0020
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Entry
BAMF_0020 CDS
T01321
Symbol
dnaX
Name
(GenBank) DNA polymerase III (gamma and tau subunits)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03030
DNA replication
bao03430
Mismatch repair
bao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAMF_0020 (dnaX)
03430 Mismatch repair
BAMF_0020 (dnaX)
03440 Homologous recombination
BAMF_0020 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bao03032
]
BAMF_0020 (dnaX)
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_0020 (dnaX)
Enzymes [BR:
bao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAMF_0020 (dnaX)
DNA replication proteins [BR:
bao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAMF_0020 (dnaX)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAMF_0020 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
TIP49
AAA_assoc_2
AAA_16
AAA_22
AAA_5
AAA_19
DnaX_C
RCF1-5-like_lid
DNA_pol3_delta_C
Rad17
PIF1
AAA_28
Mg_chelatase
AAA_7
AAA_14
DUF815
AAA_24
TsaE
Motif
Other DBs
NCBI-ProteinID:
CBI41146
UniProt:
A0A9P1JBZ7
LinkDB
All DBs
Position
28039..29730
Genome browser
AA seq
563 aa
AA seq
DB search
MGYQALYRVFRPQQFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK
AVNCEHAPVEEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITS
QAIVGRMKIIVDAEQLKVEEGALDIIASAADGGMRDALSLLDQAVSFSGDELAVDDALLI
TGAVSQHYIGKLASALHRKQVSEALETLNELLQQGKDAAKLIEDMIFYFRDMLLYQAAPD
LEGVLEKVKVDEMFRDLSGEIPAPALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT
AQQSGADIPEVGMLMNKIQQLEQEVERLKTSGVKVQAESAPKEAPRPQKGGKSHYKAPVG
RIHEILKEATRPDLEQLKSSWGKLLAHLKQQNKVSHAALLNDSEPVAAAQKAFVLKFKYE
IHCKMVAEDNNGVRTNLEQILESMLGKRMDLIGVPEAQWGKIREEFLNDHQQESEGSNEP
AEEDPLIAEAKKLVGADLIEIKD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgggttaccaagctttatatcgagtatttaggcctcagcagtttgaagatgtggtcgga
caggaacacattacgaaaacgctgcaaaatgcccttttgcaaaagaaattttctcatgca
tatctgttttctggaccacgaggaacgggaaaaaccagtgcagctaaaatatttgcgaaa
gcagtcaactgtgagcacgcccctgtagaagaaccgtgcaatgaatgcgcggcgtgcaag
gggatcacaaacggctctatatcagatgtgatcgaaatagatgcggcgtcgaataacggc
gtagacgaaatccgcgacatccgtgacaaagtaaaattcgccccgtcggccgtcacttac
aaggtatatattatagatgaggtgcatatgctctctatcggcgcattcaacgcgcttctg
aaaacgctggaagaaccgccggcacattgcattttcatattagctacgactgagcctcat
aagattcctttaaccattatctccagatgtcagcgttttgacttcaaacggattacatcc
caagcaattgtcggacgaatgaagataatcgtcgatgcagagcagctgaaggtggaagaa
ggcgcccttgatatcatagcgagtgctgcggacgggggaatgagggacgcgctgagcctg
ctcgatcaagccgtatcattcagcggcgatgagctggcggtggatgacgcattgctcatt
accggggccgtttcccagcactatattggaaaactggcatccgctcttcaccgcaaacag
gtttccgaggcgttggaaacactgaatgaattactccagcaggggaaagatgcggccaaa
ctgattgaagatatgatcttttatttcagggatatgctcttgtaccaggctgctcccgat
ttagaaggagtcctggagaaggtgaaggtcgatgaaatgttccgggatctgagcggtgaa
ataccggcccccgctttatatgagatgattgatatcctgaataaaagccatcaggaaatg
aagtggacgaaccacccaagaatcttttttgaagtggctgtcgtgaaaatatgccagacg
gcgcagcagtccggcgcagacatccctgaggtcggcatgctgatgaataagatccagcag
cttgagcaggaagtggaaaggctgaaaacctccggtgtgaaagttcaggcggaaagcgct
ccgaaagaagccccgcgtcctcaaaaaggcggaaaaagccattacaaagctccggtcgga
cgaatccatgaaatattgaaggaagccacaagacctgaccttgaacagcttaaaagcagc
tggggcaagctgctggcacacctgaaacagcagaataaggtgtcccatgcggctcttttg
aatgacagtgaaccggtggccgctgcccagaaggcatttgtgcttaaatttaaatacgaa
atccattgtaaaatggttgccgaagacaataacggagtccgtacgaatcttgaacagatt
ctcgaatcaatgctcgggaaaagaatggatttgattggcgttccggaagcacaatggggt
aaaataagagaagaatttttaaatgatcatcagcaggaaagtgaaggatcaaacgaaccg
gctgaagaagatccgcttattgcagaggcgaaaaaacttgtcggagcggatttaatcgaa
ataaaagactaa
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