Bacillus amyloliquefaciens DSM 7: BAMF_0573
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Entry
BAMF_0573 CDS
T01321
Symbol
xpf1
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bao
Bacillus amyloliquefaciens DSM 7
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bao03021
]
BAMF_0573 (xpf1)
Transcription machinery [BR:
bao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAMF_0573 (xpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
UPF0122
HTH_38
HTH_23
HTH_17
HTH_68
HTH_Tnp_ISL3
Sigma70_ECF
HTH_40
DUF134
MarR_2
Phage_antitermQ
HTH_Crp_2
HTH_36
HTH_24
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CBI41699
UniProt:
A0A9P1JEV8
LinkDB
All DBs
Position
593487..594002
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AA seq
171 aa
AA seq
DB search
MQDLIIEYKRALRETRKMYRLYKDTAEVNLTAEQINDKKIISSMISDIEFTLEWLQNGRQ
PGARRGADRRDAYQRTILADPRLIDALPGEYAIVQEAEGEVSDWDKERIADALSVLTERE
KDIFMMHAVQNMSFEEIAQLLGIKKGTVQKNIERSRLKMKNRADHSLFCLA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttaatcattgaatacaaacgggctttaagagaaacgagaaaaatgtatcgg
ctctacaaagatacagctgaagtcaatctgacagctgaacagatcaacgacaaaaagatt
atcagtagcatgatcagcgatattgaattcactcttgaatggctgcagaacggaagacag
ccgggcgctcgccgaggtgctgacagaagagatgcataccaaaggacgattcttgctgat
ccgcgcttaattgatgcgctgccgggagaatatgcaatcgttcaagaggctgagggagag
gtaagtgactgggataaggaaagaatcgctgatgccctatccgtgcttaccgaaagagaa
aaagacatattcatgatgcatgctgtgcaaaacatgtcattcgaagagatagcgcagtta
ttggggattaaaaaaggaaccgtacaaaagaacattgaacgttcccgcctgaaaatgaaa
aatagagcagatcacagcctattctgtttagcgtga
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