Bacillus amyloliquefaciens DSM 7: BAMF_0656
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Entry
BAMF_0656 CDS
T01321
Symbol
pcrA1
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03420
Nucleotide excision repair
bao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAMF_0656 (pcrA1)
03430 Mismatch repair
BAMF_0656 (pcrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_0656 (pcrA1)
Enzymes [BR:
bao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAMF_0656 (pcrA1)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAMF_0656 (pcrA1)
MMR (mismatch excision repair)
Other MMR factors
BAMF_0656 (pcrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Terminase_6N
AAA_11
ResIII
Com_YlbF
Motif
Other DBs
NCBI-ProteinID:
CBI41782
UniProt:
A0A9P1NGG6
LinkDB
All DBs
Position
678907..681126
Genome browser
AA seq
739 aa
AA seq
DB search
MNYISNQLLSGLNPVQQEAVKTTDGPLLLMAGAGSGKTRVLTHRIAYLMAEKHVAPWNIL
AITFTNKAAREMKERVESILGPGADEIWISTFHSMCVRILRRDIDRIGINRNFSILDTAD
QLSVIKGILKERNIDPKKFDPRSILGSISSAKNELIEPEEFAKTAGGYYDQVTSDVYADY
QKKLLKNQSLDFDDLIMTTIKLFERVPEVLEFYQRKFQYIHVDEYQDTNRAQYLLVKQLA
ARLENICVVGDSDQSIYRWRGADIANILSFEKDYPSANVILLEQNYRSTKRILQAANEVI
KNNSNRKPKNLWTGNDEGVKLSYYSGDNEFGEGQFVAGKIYELNSSGRRKLSDIAILYRT
NAQSRVIEETLLKAGLNYNIVGGTKFYDRKEIKDILAYLRLVSNPDDDISFTRIVNVPKR
GVGATSLEKIASYAAMNGMSLFQAIKQVDFIGVSAKAANALDGFGAMIENLTNMQDYLSI
TELMEEILDKTEYREMLKAEKSIEAQSRLENIDEFLSVTKNFEQKSEDKSLVAFLTDLAL
IADIDQLDQKEEESGGKDAVTLMTLHAAKGLEFPVVFLMGMEEGVFPHSRSLMEEAEMEE
ERRLAYVGITRAEEELYLTNAKMRTLFGRTNMNPESRFIREIPGDLLENLNEKKNPRMQP
GRKMQPKRGPVSRPVSYANKTGGDSLSWAVGDKAGHKKWGTGTVVSVKGEGESTELDIAF
PSPVGVKRLLAAFAPIEKQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaattatattagcaatcaattattaagcggattaaatcccgttcagcaggaagcggtt
aagacgacggacggtccgctgcttctgatggcgggagcgggaagcggaaagacacgtgtg
ctgacgcacagaatcgcatacttaatggcggaaaaacacgtcgcgccatggaatattctg
gcgattacatttacaaataaagccgccagagaaatgaaggagcgggtcgagagcattctc
gggcccggcgcggatgaaatctggatatccaccttccacagcatgtgcgtgcggatactg
cgcagggatattgacaggatcggcatcaaccgtaacttctccattcttgatacggctgat
cagctctccgttattaaagggattttgaaagagcggaatatcgatccgaaaaagtttgat
ccgagaagtattttaggctccatcagcagcgcaaaaaacgagctgatcgaaccggaggaa
ttcgcaaaaacggccggcggctactatgaccaggtcacgagtgacgtgtatgccgattac
cagaaaaaactgctgaaaaaccaatcgctcgattttgatgatttaatcatgacgacgatt
aagcttttcgagcgtgtgccggaagtgcttgagttttaccagcgcaaattccagtacatt
cacgtagacgagtaccaggatacgaacagagcgcaatacctgcttgttaagcagcttgct
gcccgtcttgaaaatatctgcgtcgtcggtgactccgaccagtccatttacagatggcgc
ggcgcggatatcgcgaatatcctttcttttgaaaaagattacccgagcgcaaacgtcatt
ctgctcgaacaaaactaccgctccacaaagcggattctgcaagcggccaacgaagtgatt
aaaaacaactcaaaccgcaagccgaaaaacttgtggacggggaatgacgaaggagtcaag
ctttcttattacagcggcgacaatgaattcggcgaaggccaattcgtcgcgggcaaaatt
tatgagctgaacagctcgggccggcggaagctttccgatatcgcgattttataccggaca
aacgcccagtcccgtgttattgaggaaacccttttaaaagccggactgaactacaatatc
gtcggcggaacaaagttctacgacaggaaagaaattaaagacattctcgcgtatctgcgc
cttgtgtcaaacccggacgacgatatcagttttacaaggatcgtcaatgtgccgaagcgg
ggtgtcggcgccacttcgcttgaaaaaatcgcttcatacgcggcgatgaacgggatgtca
ctgttccaggcgatcaaacaggttgatttcatcggcgtcagtgccaaagcggcaaacgcg
cttgacggctttggcgcaatgattgaaaatctgacgaatatgcaggattacctgtccatt
acggaactcatggaagaaattctcgataaaacggaatacagagaaatgctgaaggctgaa
aaatcaattgaagcccaaagccgtcttgagaatatcgacgagtttctttctgtgacgaaa
aacttcgaacaaaaaagcgaagacaagtctctcgtcgcgtttctgaccgacttggcgctg
attgcggatattgaccagctcgaccagaaggaagaggaatcgggcggaaaggatgccgtc
acgttaatgactctgcacgccgctaaagggcttgaatttcctgtcgtgttcttaatgggc
atggaagaaggcgtgttcccgcacagccgctccctgatggaagaagctgagatggaagaa
gagcgcagactcgcatatgtaggcattacaagggcggaagaagaactgtatttaacgaat
gccaaaatgcgcaccctattcggacgcaccaatatgaatccggaatcccgctttatcagg
gaaatacctggcgatttattggagaacctaaatgagaagaaaaacccgcgcatgcagccg
gggagaaaaatgcagccgaaacgcgggcccgtatcccgtcctgtttcctacgcgaataaa
acaggcggcgactcgctcagctgggctgtcggcgataaagcgggccataaaaaatggggc
accggaacggttgtcagcgtaaaaggagaaggcgaaagcacggagcttgatatcgcattc
ccgagcccagtcggcgtgaagcggctgctggccgcctttgcgccgattgaaaagcagtaa
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