Bacillus amyloliquefaciens DSM 7: BAMF_1149
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Entry
BAMF_1149 CDS
T01321
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease (subunit A)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_1149 (addA)
Enzymes [BR:
bao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAMF_1149 (addA)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BAMF_1149 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBI42275
UniProt:
A0A9P1JG33
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All DBs
Position
1174140..1177847
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AA seq
1235 aa
AA seq
DB search
MMQIPKPKDSIWTDDQWSAIVSSGRDILVAAAAGSGKTAVLVERMIRKITAEEEPVDVDR
LLVVTFTNASAAEMKHRIAEALEKELAKNPGSLHIRRQLSLLNRASISTLHSFCLQVLKK
YYYMIDLDPGFRMADQTEGELLGDEVLDELFEDEYAKGNQAFYELVDRYTTDRHDLDLQD
LVKRVYEYSRSHPDPEAWLKSFVRLYDVTEESKMEELPFYEYVREDAEMALFGAKQKLEK
ALELTKAPGGPAPRADNILDDLQQIEELISCRHDFKALYERVPAVTFKRAKAVKGDEFDK
VLLDEATDLRNGAKKLIEKLKTDYFTRSPQDHLKSLKDMKPVIETLVQLVISYGKRFEAA
KQEKSIIDFSDLEHYCLAILTARDEEGRRVPSEAAVYYQDQFHEVLVDEYQDTNLVQESI
LQLVKSGNEESGNLFMVGDVKQSIYRFRLAEPLLFLGKYKRFTEDGEGAGQKIDLNQNFR
SRSDILDSTNFLFKQLMGGKIGEVDYDEQAALKLGASYPPNDAAKTELLLIDSADDADSP
EDAEDFETVHWEAKAIAAEIRKLVSSPFKVYDGKTKTHRNIQYRDIVILLRSMPWAPQLM
EELKNQGIPVYANLTSGYFEAVEVAAALSVLKVIDNPYQDIPLASVLRSPIVGCDENELA
LIRLEKKKAPFYEALKAYIANGDRHDDLYQKLRIFYDSLQKWRSFSTNHSVSELIWEVYR
DTGYFDYAGGMPGGKQRQANLRVLYDRARSYEATAFRGLFRFLRFIERMQERGDDLGTAR
ALSEQEDVVRLMTIHSSKGLEFPVVFTAGLGRSFNMMDLNKPYLLDKELGFGTKYIHPEL
RISYPTLPLVAMKKKMRRELLSEELRVLYVALTRAKEKLFLVGSCKNREKQLAKWQAQAD
RADWLLSEFDRYQASSYLDFIGPALIRHSDMEAHRAPGLLAPEDIAHDPARFHIRMLQQS
ELLEDSPEERAEEKSKRLKAIQHGEPIPDSFSFDDQARRLLEWEYPYRKLTAIRTKQSVS
ELKRKQEYEDEYSGRSLIKPSGDTLLYKRPGFMMKKGLTAAEKGTAMHTVMQHIPLTHVP
TAEEAERTVRMLYEKELLTEEQQDAIDIDEVIQFFGTEIGKDLVGALRIDREVPFSMALP
ASEVYKDAETAGEPLLVQGIIDCLYETADGLYLLDYKTDRIEGKFRNGFEGAAPILQKRY
ETQIELYTKAVEQITKTNVKRRALYFFDGGHVLTL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaattcctaaaccgaaagacagcatatggacggatgaccaatggagcgccatc
gtttcttccggccgcgatattctggtcgctgccgcagccggatcaggtaaaacggccgtg
cttgtagagcggatgatcagaaagataaccgcggaagaagagccggttgatgttgacagg
ctccttgtggtgacatttacaaacgcctcagcagcggaaatgaagcatcggatcgctgaa
gcattagaaaaagaactcgccaaaaatccggggtctttgcatatcagacggcagctgtct
ctattaaatcgggcgagcatttcgacgctgcactctttctgtctgcaggtgcttaaaaaa
tattattatatgattgatcttgacccgggttttcggatggctgaccaaacggaaggcgaa
ttgctcggagacgaagtgcttgatgagctgtttgaggatgaatacgcaaaagggaatcag
gcgttttatgagcttgtggacagatatacgacggacaggcatgatctggatcttcaagac
ctcgtcaagcgggtgtatgagtattcccggtcgcatcctgaccctgaagcgtggctgaaa
agctttgtccgcctatatgatgtgacagaagaaagcaaaatggaagagctgccgttttac
gagtatgtgagagaagatgctgaaatggcgctcttcggggcaaaacaaaagctagagaag
gcgcttgaactgacaaaagcgcccggcgggccggcgccgcgtgctgataatattttggat
gaccttcagcagatagaagagctgatcagctgccggcatgactttaaggcgctgtatgaa
cgggttcctgcggtcacatttaaacgggccaaggcggtaaagggtgatgaatttgacaag
gtgcttttggacgaagcgactgatttgcgaaacggcgcgaagaaactgatcgaaaagtta
aaaaccgattactttacaagaagcccgcaagatcatttaaagagtttaaaagacatgaag
cctgttattgaaaccctcgttcagctcgtaatatcgtacggaaaacgatttgaagcggcg
aaacaggaaaaatcaatcattgatttctcagatttggaacattactgtctggcgatttta
actgcaagggatgaagaaggccggcgtgtgccgagtgaagcggccgtttattatcaagat
cagttccatgaagttctggttgatgaatatcaagataccaatcttgtgcaggaatccatt
ttgcagcttgttaaaagcgggaatgaagagtcgggaaatctgtttatggtgggggacgtc
aagcaatcaatctaccgtttcagacttgccgagccgctgctttttctcgggaaatacaaa
aggtttacggaagatggggaaggcgccgggcagaaaatcgacctgaaccaaaacttccga
agccgctccgatattttggacagtacgaatttcttgtttaagcagctgatgggcggcaaa
atcggcgaagtggactacgatgaacaggcggcattaaagcttggcgcatcgtatccgcca
aatgacgcggcgaaaacggaactgctgctgattgacagcgctgatgacgcagacagcccc
gaggatgctgaagactttgaaaccgtgcattgggaagcgaaagcgatagccgcggagatc
cggaagcttgtctcatctccgtttaaggtatatgacggcaaaacaaaaacacaccggaat
atccagtaccgggatatcgtgattttgctgcgttccatgccatgggctccgcaattaatg
gaagagctgaaaaaccagggcattccggtttacgccaatttgacatcaggttactttgaa
gccgttgaggtggctgcggcgctttcagtcttaaaggtgattgataatccgtatcaggat
attccgcttgcttccgtgctgcgctcgcctatcgtcggttgtgacgaaaatgaactcgcc
ctcatacgccttgaaaagaaaaaagcgccgttttatgaagcgctgaaagcgtatatagcg
aacggggacagacatgacgacctgtatcaaaaactgagaatattttatgacagtctgcaa
aagtggcggtcattctcgacgaatcattcagtgtctgagctgatttgggaagtataccgc
gacaccggatattttgattatgcaggcggcatgcctggcggaaagcagcgtcaggccaat
ctgcgcgtcttgtatgaccgggcgcgttcgtatgaagcgacggcattccgcgggttattc
cgctttttgcggttcattgaacggatgcaggagcgcggcgatgatttggggacggcgcgg
gcgctcagcgagcaggaggatgtcgttcggctgatgacgatccacagcagcaaaggactt
gaattccccgtcgttttcaccgccggtctcggcagaagttttaatatgatggatctcaac
aaaccatacctgcttgataaagagctcggtttcggcacgaagtatattcatccggaactt
agaatcagctatccgactctgccgcttgtggcaatgaagaaaaaaatgcgcagagagctt
ttatcagaagaattgcgcgtattgtatgtggcgctgacaagggcgaaggaaaagctgttt
ctcgtcggttcctgcaaaaaccgggaaaaacagctggccaaatggcaggcgcaagcagac
cgggctgattggctcctttctgaattcgaccgctatcaggcgtcatcttatttggacttt
atcggtccggcgctcatccgtcacagtgacatggaggcgcacagggctccggggcttttg
gcgccggaggatatcgcgcacgacccggcgcgttttcacatccggatgctgcagcaaagt
gaattgctggaagatagccctgaggaacgtgctgaagaaaagagcaaacgtttaaaagcg
atacagcatggcgagccgattcctgattcgttttcattcgatgatcaggcgcgccgtctt
cttgaatgggaatatccgtatcggaagctgaccgccatcagaacgaagcagtctgtttct
gagctgaagagaaagcaagaatacgaggatgagtacagcggacgctctctcatcaaaccg
tcaggggacactcttttatacaagcgtcccggctttatgatgaaaaaagggctgacagcc
gccgaaaaagggactgcgatgcatacggtgatgcagcacataccgctgacgcatgttccg
actgccgaagaagcggagcggacggtccggatgctttacgaaaaagagctgctgacagaa
gaacagcaggacgcaattgatattgatgaagtgattcagtttttcggcactgaaatcgga
aaagaccttgttggggccctgcggattgatcgggaggtgccgttcagtatggcgcttccg
gccagcgaggtgtacaaggatgccgaaacggccggtgaaccgctgctcgtccagggaatt
attgactgcctctatgaaactgcggacggactctatttgctggactataaaacggatcga
attgaggggaaattccggaacggatttgaaggcgcggctccgatcctgcaaaaaaggtat
gaaacacaaatcgaattgtatacaaaagcggttgaacaaattacaaaaacgaatgtgaaa
aggcgtgcgctctatttcttcgatggaggtcacgttcttacactgtaa
DBGET
integrated database retrieval system
