Bacillus amyloliquefaciens DSM 7: BAMF_1536
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Entry
BAMF_1536 CDS
T01321
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao00010
Glycolysis / Gluconeogenesis
bao00020
Citrate cycle (TCA cycle)
bao00260
Glycine, serine and threonine metabolism
bao00280
Valine, leucine and isoleucine degradation
bao00310
Lysine degradation
bao00380
Tryptophan metabolism
bao00620
Pyruvate metabolism
bao00630
Glyoxylate and dicarboxylate metabolism
bao00640
Propanoate metabolism
bao00670
One carbon pool by folate
bao00785
Lipoic acid metabolism
bao01100
Metabolic pathways
bao01110
Biosynthesis of secondary metabolites
bao01120
Microbial metabolism in diverse environments
bao01200
Carbon metabolism
bao01210
2-Oxocarboxylic acid metabolism
bao01240
Biosynthesis of cofactors
Module
bao_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bao_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bao_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bao_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BAMF_1536 (pdhD)
00020 Citrate cycle (TCA cycle)
BAMF_1536 (pdhD)
00620 Pyruvate metabolism
BAMF_1536 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
BAMF_1536 (pdhD)
00640 Propanoate metabolism
BAMF_1536 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BAMF_1536 (pdhD)
00280 Valine, leucine and isoleucine degradation
BAMF_1536 (pdhD)
00310 Lysine degradation
BAMF_1536 (pdhD)
00380 Tryptophan metabolism
BAMF_1536 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BAMF_1536 (pdhD)
00670 One carbon pool by folate
BAMF_1536 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bao04147
]
BAMF_1536 (pdhD)
Enzymes [BR:
bao01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BAMF_1536 (pdhD)
Exosome [BR:
bao04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BAMF_1536 (pdhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
NAD_binding_8
AlaDh_PNT_C
Amino_oxidase
NAD_binding_9
DAO
Tox-PAAR-like
Lys_Orn_oxgnase
UDPG_MGDP_dh_N
Thi4
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
CBI42662
UniProt:
A0A9P1JGQ4
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All DBs
Position
1537326..1538738
Genome browser
AA seq
470 aa
AA seq
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MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALIN
AGHRYENAKHSDDMGITAENVKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAY
FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV
VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD
KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAIAGEPAEIDYLGIPAVVFSEPELA
SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA
SDMISELSLSIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacctggc
ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa
ggaactcttggtggcgtttgtctgaacgtcggctgtattccttcaaaagcgcttatcaat
gcaggccatcgttacgagaatgcaaaacattcagatgacatgggaatcactgctgagaac
gtaaaagttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttact
ggcggtgttgcaggtcttttaaaaggaaataaagtcgaagttgtaaaaggcgaagcttat
ttcgtagacagcaactctgtccgcgtaatggatgagaactctgcgcaaacatatacattt
aaaaacgcgatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc
gaacgcgttctgaactctacaggcgcactggcgcttaaagaaattccgaaaaagctcgtt
gttatcggcggcggatacatcggtactgagcttggaacagcgtatgcaaactttggaact
gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt
tctcttgttacccgcagactgaagaaaaaaggcaacgttgaaattcatacaagcgctatg
gctaaaggcgttgaagaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa
gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgat
gagctcggtcttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac
aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct
ccattggctcacaaagcgtcttacgaaggtaaaatcgctgcggaagctattgcaggagag
cctgctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct
tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgctgccaaa
ttcccgtttgcagcaaacggacgcgcgctgtctcttaacgaaactgacggcttcatgaag
ctgatcactcgtaaagaagatggtcttgtgatcggtgcgcaaattgccggcgcaagcgct
tctgacatgatttctgaattgagcctgtcgatcgaaggcggaatgactgctgaagatatc
gcaatgacaattcacgctcacccgacattgggcgaaatcacaatggaagctgccgaagta
gcaatcggaagcccgatccacatcgtaaaataa
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