Bacillus amyloliquefaciens DSM 7: BAMF_1719
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Entry
BAMF_1719 CDS
T01321
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-28 factor (sigma-D)
KO
K02405
RNA polymerase sigma factor FliA
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao02020
Two-component system
bao02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAMF_1719 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAMF_1719 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bao03021
]
BAMF_1719 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bao02035
]
BAMF_1719 (sigD)
Transcription machinery [BR:
bao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAMF_1719 (sigD)
Bacterial motility proteins [BR:
bao02035
]
Flagellar system
Flagellar assembly proteins
Stator
BAMF_1719 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
UPF0122
IF2_N
UPF0175
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
CBI42845
UniProt:
A0A9P1JH54
LinkDB
All DBs
Position
1717724..1718488
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AA seq
254 aa
AA seq
DB search
MQSLNYEDQVLWSRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPGRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVTPSEIAEELGMTEQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAGKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKHLLEKVIQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattatgaagatcaggtgctgtggtcgcgctggaaagagtggaaagat
cctaaagccggtgatgatttaatgcgccgttacatgccgctggtcacatatcatgtcggc
agaatttccgtcggactgccgaaatcggtgcataaagacgatctaatgagccttggtatg
ctcggtttatacgatgccctagaaaaattcgaccccggccgggatttaaagtttgatacc
tatgcctcgtttagaattcgcggtgcaatcatcgacgggctgcgtaaagaagattggctg
cccagaacttcacgggagaagacaaaaaaagtcgaagcggcgatcgaaaaacttgaacag
cgctacctacggaatgtgacgccttcagagatcgccgaagagctggggatgacggagcag
gacgtagtatcaacgatgaatgaaggcttttttgccaatctcttatcaattgatgaaaag
cttcacgaccaggatgacggtgagaatattcaagtgatgatcagagatgacaaaaatgtg
ccgccggaagaaaaaattatgaaggacgagctgatcgcccagcttgcaggcaaaatccac
gagctttctgaaaaagaacagcttgtcgtcagtttattttataaagaagaactgactctg
accgaaatcggacaagtcctgaacctttcgacctcacggatttcgcagattcattcaaag
gcgctgtttaaattaaagcatctgcttgaaaaagtaattcaataa
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integrated database retrieval system
