Bacillus amyloliquefaciens DSM 7: BAMF_2411
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Entry
BAMF_2411 CDS
T01321
Symbol
nvfo
Name
(GenBank) type IV apurinic/apyrimidinic endonuclease
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAMF_2411 (nvfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_2411 (nvfo)
Enzymes [BR:
bao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BAMF_2411 (nvfo)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BAMF_2411 (nvfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
OST3_OST6
Motif
Other DBs
NCBI-ProteinID:
CBI43537
UniProt:
A0A9P1NI62
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All DBs
Position
complement(2456068..2456961)
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AA seq
297 aa
AA seq
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MLKIGSHVSMSGKHMLLAASKEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMKE
NGIDEIVVHAPYIINIGNTTNPATFELGVDFLRSEIERTAAIGAKQIVLHPGAHVGAGAE
TGIKKIIEGLNEVIDPDQSVQIALETMAGKGSECGRSFEELAEIIAGVTHNEHLSVCFDT
CHTHDAGYDVANDFDGVLNEFDKIVGIDRIKVLHVNDSKNIRGARKDRHENIGFGEIGFN
ALQYIVHHEQLADIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDKELLEKILAQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaaaataggttcacacgtctcaatgagcggaaaacatatgctccttgccgcaagc
aaggaagccgtttcgtacggggcgaacacatttatgatatatacgggcgctccccaaaat
acgcgccgcaaaaaaattgaagacttgaatattgaagcgggccgcgcccatatgaaggaa
aacggcatcgacgagattgtcgtgcatgcgccatatatcattaacatcggaaatacgact
aatccggcaacgtttgagctgggcgttgattttctccgttctgaaattgaaagaacggca
gcgatcggcgcgaaacagatcgtgcttcatccaggggcgcatgtcggtgccggggctgaa
acgggcatcaaaaaaatcattgaaggattaaacgaagtgattgatccggatcaaagcgtg
cagatcgcgctggagacaatggcgggaaaagggtcagaatgcggaagaagctttgaagag
cttgccgagatcattgcgggcgttacacataatgaacatctttccgtctgctttgacact
tgccatacgcatgatgcaggatatgatgttgccaatgattttgacggtgttctcaatgag
tttgataaaatcgtcggcatcgaccggataaaagtccttcatgtgaacgacagtaaaaat
atcaggggagcccggaaagaccgtcatgaaaatatcgggttcggtgagatcggttttaac
gcgctgcagtacattgttcatcacgagcagctggccgatattccgaaaatccttgaaaca
ccgtatgtgggcgaagacaaaaaaaataagaagccgccataccgttttgaaatcgaaatg
ctgaaagaaaagcaatttgataaggagcttcttgaaaaaatattagctcaataa
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