Bacillus amyloliquefaciens DSM 7: BAMF_2412
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Entry
BAMF_2412 CDS
T01321
Symbol
cshB
Name
(GenBank) DEAD-box RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bao03019
]
BAMF_2412 (cshB)
03009 Ribosome biogenesis [BR:
bao03009
]
BAMF_2412 (cshB)
Enzymes [BR:
bao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAMF_2412 (cshB)
Messenger RNA biogenesis [BR:
bao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAMF_2412 (cshB)
Ribosome biogenesis [BR:
bao03009
]
Prokaryotic type
rRNA helicases
BAMF_2412 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBI43538
UniProt:
A0A9P1NI54
LinkDB
All DBs
Position
complement(2456973..2458289)
Genome browser
AA seq
438 aa
AA seq
DB search
MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIYQEALKITQGAEDEQIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDLGFLEDVDYIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SNLNPYLGIVFANTKNTADHIAKYLTEKGMRIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALVRL
EKMGIEFAYAELVNGEWKKGDDRHRRKKRKKTENEADQIAKRLVKKPKKVKPGYKKKMSY
EMEKIRRKQRRNQSNKGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagaggctgatacctgctgtattgaaa
aacgaaagcgtcatcgggcagtcccaaacgggaacgggaaaaacccacgcctatttattg
cctatcctgaatcggattgatccgggttctgatacggtacaggctgttatcacagcgccg
acgagagagcttgccaatcagatttatcaggaagcgcttaaaatcacacagggtgcagaa
gacgagcagatccggacaaaatgctttatcggcggaacggacaagcaaaaatcgattgat
aagctgaaaacacagcctcatctcgtcgtcggaactccgggccggattgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagctgatctg
atgcttgatttggggtttttggaagacgttgattacatcgggtcgcgtatgccggaagaa
cttcagatgcttgttttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaaatacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgttttggttccttctaaacagcgtgataaagacaagctgctttttgatatgatg
tctaatctgaatccgtatttgggcattgtgtttgcaaatacgaaaaacactgctgaccat
attgcgaaatacctgactgaaaaaggcatgagaatcggccttctgcacgggggattaacg
ccgcgtgagcgtaaaaaggtaatgaagcagattaatgatctggagttcacttatgtcatt
gcgacagaccttgcggcaagaggaattgacattaaaggcgtaagccatgtcatcaactac
gagcttccggacgatctggatttttatgttcaccgcgtaggaagaacagcgcgcgccggc
tcatcaggccaagcactgaccatttatgagctttctgacgaagatgcgctcgtaagactc
gagaagatgggcattgagtttgcttatgcggagcttgtaaacggagaatggaaaaaaggc
gatgaccgccaccgccgcaagaaacgtaaaaagacggaaaatgaggcagaccaaattgcg
aagcgccttgtgaaaaagccgaaaaaagtaaaaccgggctataaaaagaaaatgagctat
gaaatggaaaaaatcagaagaaaacagagaagaaaccaatctaacaaagggaagtag
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