Bacillus amyloliquefaciens DSM 7: BAMF_2440
Help
Entry
BAMF_2440 CDS
T01321
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bao03016
]
BAMF_2440 (rimO)
Enzymes [BR:
bao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
BAMF_2440 (rimO)
Transfer RNA biogenesis [BR:
bao03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
BAMF_2440 (rimO)
Prokaryotic type
Methylthiotransferases
BAMF_2440 (rimO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Ig_SMCHD1_2nd
DUF6836
Motif
Other DBs
NCBI-ProteinID:
CBI43566
UniProt:
A0A9P1NI19
LinkDB
All DBs
Position
complement(2484380..2485735)
Genome browser
AA seq
451 aa
AA seq
DB search
MATVAFHTLGCKVNHYETEAIWQLFKDAGYERKEFEQTADVYVINTCTVTNTGDKKSRQV
IRRAIRQNPDGVICVTGCYAQTSPAEIMAIPGVDIVVGTQDREKMLGYIEQYREERQPIN
GVGNIMKARVFEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLLRSRDPEEVIKQ
AQQLVDAGYKEIVLTGIHTGGYGEDMKDYNFAKLLRELDTRVEGLKRIRISSIEASQITD
EVIEVLDASDKIVRHLHIPIQSGSNTVLKRMRRKYTMEFFADRLNKLKEALPGLAVTSDV
IVGFPGETEEEFMETYRFIKEHKFSELHVFPYSKRTGTPAARMEDQVDENVKNERVHKLI
ALSDQLAKEYASDYEGEVLEIIPEETFKESDEDGMFVGYTDNYMKVVFKGTEDLIGKLVK
VKIQKAGYPYNEGQFVRVVEEEMTQNMRMSS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgttgcttttcatacccttggctgcaaggtcaatcattatgaaacagaagca
atctggcagctgtttaaagatgcgggttatgaacgaaaagaattcgaacagacagcagat
gtatatgtcattaatacatgtacggtaacaaacacgggagataaaaaaagccgtcaagtc
atcagaagggcgatccgccaaaatcctgacggcgtaatctgcgtaacagggtgctatgcg
caaacatctccggcagaaattatggccatcccgggtgttgacattgtcgtcggcacgcag
gatcgtgaaaaaatgctcggctacattgagcagtacagggaagagcgccagccgatcaac
ggtgtcggcaacattatgaaagcacgcgtgtttgaagagctggatgttcccgcttttact
gaccggacaagagcgtcattgaaaatccaagagggctgcaacaacttctgtacgttctgc
attattccttgggcgcgcggcctgcttcgttcccgcgatcctgaagaagtcattaaacag
gcgcagcaactggtggatgccggttataaagaaatcgttctgactgggattcatacgggc
ggctacggcgaagatatgaaagattataattttgccaagcttcttcgtgagttggataca
cgtgtagagggactgaaacggatcagaatttcatctattgaagcaagccaaatcactgat
gaagtgattgaagtgctggatgcgtctgataaaatcgtccgccaccttcacatcccgatt
caatcaggatcaaacaccgtgctgaaacggatgagacgaaaatatacgatggaatttttc
gctgaccgtttaaataagctgaaagaagcactgccgggtcttgccgtaacttctgatgtt
atcgtcggtttcccgggtgaaacagaagaagaatttatggaaacataccggttcattaaa
gaacataagttttctgagcttcatgtattcccttacagcaaacgcaccggaacacctgcg
gccagaatggaagaccaggttgacgagaatgtgaaaaatgaacgggtgcacaagctgatt
gccctgtctgaccagcttgccaaagaatatgcctctgattacgaaggagaggttctggaa
atcattccggaggagacgtttaaagagtctgatgaagacggcatgttcgtcggctatacg
gacaattacatgaaagtcgtcttcaaaggcacggaagatttaatcggcaaacttgttaaa
gtcaaaattcaaaaagcaggctatccgtacaatgaaggacaattcgtccgcgtcgttgag
gaagaaatgactcagaacatgcgcatgtcttcataa
DBGET
integrated database retrieval system
