Bacillus amyloliquefaciens DSM 7: BAMF_2453
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Entry
BAMF_2453 CDS
T01321
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03030
DNA replication
bao03430
Mismatch repair
bao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAMF_2453 (holA)
03430 Mismatch repair
BAMF_2453 (holA)
03440 Homologous recombination
BAMF_2453 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bao03032
]
BAMF_2453 (holA)
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_2453 (holA)
Enzymes [BR:
bao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAMF_2453 (holA)
DNA replication proteins [BR:
bao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAMF_2453 (holA)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAMF_2453 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF4704
Ribonuc_red_2_N
DUF1319
Motif
Other DBs
NCBI-ProteinID:
CBI43579
UniProt:
A0A9P1JIG0
LinkDB
All DBs
Position
complement(2498789..2499811)
Genome browser
AA seq
340 aa
AA seq
DB search
MVFDVWKALKKGDVRSVYCLYGKETYLLQETVSRIRQAVVDEETKDFNLSVFDLEEDPLD
QAITDAETFPFMGEKRLVIVKNPSFLTGEKKKEKIEHNTSALETYLKEPAPYTVFVIVAP
YEKLDERKKLTKALKQKALMIEAKELNAKETTDFTINLAKSENKTMDTEAAEHLVLLANG
HLSSIYQEIQKLSAYTGDRHEITLEDVRELVARSLEQNIFELINKIVNRKRTESLQIFYD
LLKQNEEPIKIMALIANQFRLIMQTKYFAGQGYGQKQIASNLKVHPFRVKLAMDQARLFS
EEELRRIIERLAVMDYEMKTGKKDKQLLLELFLLELLGTE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgatgtttggaaagccctgaaaaaaggggatgtccgctccgtttattgctta
tacggaaaagaaacgtatctgctccaagagactgtcagccggatcagacaagctgtcgtt
gatgaggagactaaagattttaacctgtctgtttttgatcttgaagaggatccgcttgac
caggccataaccgatgcggaaacgtttccgtttatgggagagaagcggctggttatcgta
aaaaatccgtcttttttaacaggggaaaaaaagaaagaaaaaatagagcataatacaagc
gctttggagacttacctgaaggagcctgcgccttatacggtctttgtgattgtggctccg
tatgaaaagctggacgaacggaaaaagctgacgaaagcgctgaagcaaaaagcccttatg
attgaagctaaggagctgaatgcaaaggagacgactgattttacgattaatctggcgaaa
tccgaaaataaaacgatggatacagaagctgccgagcatttggttctgcttgcaaacggc
catctgtcttccatatatcaggaaatacaaaaactctccgcctacaccggtgacagacat
gagatcacgcttgaagatgtccgggagcttgtcgcaagaagtttggagcagaatattttt
gagctgatcaacaaaatcgtgaaccgaaaacggacggaaagtcttcaaatattttatgat
cttttaaaacaaaacgaagaaccgatcaaaattatggcgctgatcgccaaccaattccgt
ctgattatgcagacaaagtattttgcgggacaaggatacggccaaaagcaaatcgcttcc
aacttaaaggtgcaccccttccgggtaaagctggcgatggatcaggcgaggctattttct
gaagaagagctgcggcgtattatagaaaggctcgcagtgatggattatgaaatgaaaacg
gggaaaaaggacaagcagctcttgctggagctctttctccttgagcttctcgggactgaa
tga
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