Bacillus amyloliquefaciens DSM 7: BAMF_2572
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Entry
BAMF_2572 CDS
T01321
Symbol
recJ
Name
(GenBank) putative single-strand DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03410
Base excision repair
bao03430
Mismatch repair
bao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAMF_2572 (recJ)
03430 Mismatch repair
BAMF_2572 (recJ)
03440 Homologous recombination
BAMF_2572 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_2572 (recJ)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BAMF_2572 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BAMF_2572 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BAMF_2572 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PGM_PMM_II
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBI43698
UniProt:
A0A9P1JIN9
LinkDB
All DBs
Position
complement(2618384..2620741)
Genome browser
AA seq
785 aa
AA seq
DB search
MLASKMRWEIQQPDKEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
YELKGMREAVDRIKLAVSRGEPIMIYGDYDADGVTSTSVMLTALRQLSANVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCSYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIERLRTTNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM
TDDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGMDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVADLRDRLNQMAEETLTEEDFIPVQEVDLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVENAVLDEVRLIGANKNHVKMTVKNDSAALDCVGFNKGELEAGIVPGSTISIVG
EMSINEWNNRKKPQLMIKDAAVPEWQLFDIRGKRMWEDTVTALPKEKRVLISFNEKTARK
LRAELSGELAEITSESEAEALPLDGKYAVFLDVPPSADRLQRLLDGKKPERIYFVFINHE
EHFLSSFPSRNDFKWFYAFLLKRGTFNLGKHGSELARHRGWSIDTINFMTKVFFDLGFVK
IEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAYE
STRRT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggataaggaaaaggtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcgctgcttgtaaaaagaggtttt
gatactgccgaaagtgcaaggctgtttttacatacaaaggatgcagacttttatgacccg
tatgaattaaagggaatgcgggaagcagttgatcggataaagctggcggtttcccgcggg
gaaccgattatgatttacggagattacgatgcagacggcgttacaagcacgtcagtgatg
ctgacggcgctcagacagctgtcagcgaacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaagctttccgctccataaaagagcggggattttcgctc
atcattacagtggatacgggtatcgccgccgttcatgaagccgaagtcgcaaaagagctc
ggtttagacgtcattattaccgaccaccatgagccgggacccgagcttcctgacgtattt
gcgattatccacccgaagcagccgggctgcagctatccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccacgcgcttacgggttctttgccggaagctatgctggac
ttggcggcgatcggtacggttgctgatctggtgccgctgcatgatgaaaacagattaata
gcgtcgcttggaatcgaaaggcttcggacgacaaatcggccgggtctcaaagctctgatt
aagctttccggcggagatatcggacaagccgatgaggaaacgatcgggtttcaggtcgca
ccgaggctgaatgccgtcggaagaatagaacaggctgatcccgcggtgcacctgttgatg
accgatgaccagtttgaagcggaggagctggcttcggatattgaccggctgaataaagag
cggcagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccttctgccattgtcgtggcaaaagccggctggaatccgggagttgtcggtatt
gtcgcatcgaagctggctgaacgcttttaccggcccgctgttgtgctggggatggatgag
gagcagggaatcgccaaagggtcggcgcgaagcatcagaggctttaacctttttacgagc
ctgtcacagtgcagagacattcttcctcatttcggcggacatccgatggccgcaggaatg
actttgaaggctgaagatgtggcggatttaagggatcggctgaatcaaatggctgaagaa
acccttaccgaagaggattttatccccgttcaggaggttgatcttgtctgcggcgtcgaa
gacatcaccgttgaaagcattacagaattgaatatgctgtcgccgttcggcatgctaaac
cctaaacctcatgtgatggtggaaaacgccgtgcttgatgaggtgcgcctgatcggagca
aataaaaatcacgtgaaaatgacggtgaaaaatgattccgccgctctcgactgcgtcggc
tttaacaaaggagagcttgaagccgggattgttcccggatcaacgatttccattgtcggc
gagatgtctattaatgaatggaacaacagaaagaaaccccagctgatgattaaagatgct
gcggtgccggaatggcagctttttgatatcaggggcaagcggatgtgggaagatacggtc
actgcgctgcctaaggaaaaacgggtgctcatcagctttaacgaaaaaaccgcccgaaag
ctccgtgccgagctttcgggtgagctggctgagatcacgtcggaatccgaagcagaagct
cttccgcttgacggaaagtatgccgtttttctggatgtgccgccatcagcggaccgcctc
cagcgtttgcttgacgggaagaagccggaacggatttattttgtttttattaatcatgaa
gaacatttcctgtcctcatttccatcgcggaatgacttcaagtggttttacgcatttctc
ttgaaaaggggcacttttaacttaggcaagcatggttcagagcttgcgagacacagagga
tggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgttaaa
atagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctcgcagattcg
caaacctatcaggtaaaacagcagctgatggaattagaccagaagctcaattattccgca
gcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaggcttatgaa
agtacgaggaggacatag
DBGET
integrated database retrieval system
