Bacillus amyloliquefaciens DSM 7: BAMF_2726
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Entry
BAMF_2726 CDS
T01321
Symbol
dnaE
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03030
DNA replication
bao03430
Mismatch repair
bao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAMF_2726 (dnaE)
03430 Mismatch repair
BAMF_2726 (dnaE)
03440 Homologous recombination
BAMF_2726 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bao03032
]
BAMF_2726 (dnaE)
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_2726 (dnaE)
Enzymes [BR:
bao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAMF_2726 (dnaE)
DNA replication proteins [BR:
bao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAMF_2726 (dnaE)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAMF_2726 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CBI43852
UniProt:
A0A9P1NIH7
LinkDB
All DBs
Position
complement(2777823..2781170)
Genome browser
AA seq
1115 aa
AA seq
DB search
MAALSFVHLQVRSGYSLLNSAASVKEIVTQAKELGYSSLALTDENVMYGAIEFYKACKSH
GIKPIIGLTASIYTDETELEARPLVLLAETNTGYQNLLKISSALQSIAKGGMKRKWMKSY
HEGLIAITPGENGYIESLLQAGEFEEAVRVAEGFRELFGEGRFYLGYQPFKGHETLSEEI
LRLSAETEIAVCAAGDVRYIKKEDQDAYRCLCAIKAGEKWEDQSGDLPDLYLRPPEEMEN
IYMKNPEAVKAAARVAQQCQVDVSLGQTQLPSFPAPDGKSADDYLAEVCHEGLRLRFGTP
DERAVRRLEYELDVIRRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAAGSLVAYSLFIT
DVDPLKHSLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQNKYGSMHVAQIITFGTLA
AKAALRDTGRVFGISPKEADQLARLIPSKPGMTLEEARRQSAQLNRRLSESAVLHKVFQI
ARKIEGLPRHTSTHAAGVVLSKEPLSEVVPLQEGHDGVYLTQYAMDHLEDLGLLKMDFLG
LRNLTLIESIKTMIEKETNTKIDFSEISYQDEKTFSLLSNGDTTGIFQLESSGMRNVLKR
LKPSRLEDIVAVNALYRPGPMENIPLFIDRKHGRARVEVPHEDVRNILSDTYGVIVYQEQ
IMMIASRMAGFSLGEADLLRRAVSKKQKDILDRERSHFVEGCLKKEYSVVTANEVYDLIV
KFANYGFNRSHAVAYSMIGYQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLHEAKGSGL
QVLPPSVNKSGFPFAPENGAVRYSLRAIKNVGVSAVKDIYKARTHKPFEDLFDFCFRVPA
KSVNRKTIEALIFSGAMDEFNQNRAALLASVDVALEHAELFRADDDQMGLFLEESFSIKP
KYVEAEEFPLVDKLRFEKEALGVYFSSHPLSAFRNLLKKRGAQAIATALQMPKGQLSIGA
LLAGIKTIRTKTGQHMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFASGKMEERQ
EKIQFIMSSASLLEQTEADRAPSVYIKIEGSRHNQEFLEKMKRILLEHKGETGVYLYYEK
DKQTIRLPDTFHIQADHQALYRLKELLGRENVVLK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcattgtcttttgttcaccttcaagtacgtagcggctacagcctgttaaacagc
gccgcttctgtaaaagagattgttacacaagcgaaggagctcggatattcttcattggcg
ctcacggacgaaaatgtgatgtacggcgccattgagttttataaagcatgcaagtcacac
ggaataaagccgattatcggtctgacggcttcaatatacacggacgaaactgagcttgaa
gcacgcccgcttgttcttttggcggagacaaacaccggatatcagaacctgctgaaaatc
tcaagtgcgctgcaatccatagcaaagggcggcatgaagcgaaaatggatgaagagctat
catgaagggctgatcgccattacgcccggtgaaaacgggtacattgaaagcctgcttcaa
gcaggagagtttgaagaagcggttcgggttgccgaaggattccgggaattgttcggagaa
ggccgtttttatttagggtaccagccgtttaaaggacatgagacattatcagaagaaatt
ctccgcctgtcagccgagacggaaatcgctgtctgcgcggcgggggatgtccgttatatc
aagaaagaagatcaagatgcgtaccgctgtctgtgcgccattaaagccggggagaaatgg
gaggatcagagcggggacctgccggacttatacttgaggccgcctgaagaaatggaaaat
atttatatgaagaatccggaagcggtcaaagcagccgcacgtgtcgctcagcaatgccaa
gtcgatgtcagcctcggacagacacagcttccgtctttcccggcgccggacggcaaatca
gctgatgactatttggcggaagtctgtcatgaggggcttcgtctccgtttcggcactcct
gatgagcgtgctgtccgccgtcttgaatatgagctggatgtcatcaggcgcatgaaattc
agtgattactttctcatcgtatgggactttatgaagtacgcgcatgaaaagggcattgtg
acaggtccgggaagggggtctgcggcaggctcgcttgtcgcttactcccttttcattaca
gacgtggacccgcttaaacattctttgttattcgagaggtttcttaatcccgagcggatc
agcatgcccgatattgatatcgatttccctgatacgagaagggatgaggtcattcagtat
gtgcaaaataagtatgggagcatgcacgtcgcccagattatcaccttcggaacattggcc
gcaaaggcggcgttaagggataccggcagagtgttcggaatcagcccgaaagaagccgac
cagcttgcccgcctgattccgtctaagccgggaatgacgcttgaggaggcgagacggcag
tccgctcagctgaacaggcggctgtctgaatccgccgttcttcataaagtgtttcagatc
gcaaggaaaatcgaaggtcttccgaggcatacgtctacacacgcggccggcgttgttctc
agcaaagagccgctttctgaagttgtccctctgcaggaagggcatgacggcgtgtattta
acgcagtatgcgatggatcacttggaagatctcggccttttgaaaatggactttttaggt
ttgcgcaacctgacgcttatcgaatccattaagacgatgattgaaaaagagacaaatacg
aaaattgatttttccgagatttcttatcaggatgaaaaaacgttctcgctattatcaaat
ggcgatacgacggggatttttcagctggaatcatcaggaatgaggaatgtgctgaagcgt
ctgaagccgtcaaggcttgaagacattgtcgcggtaaacgcgctttacaggccggggccg
atggaaaatattccgctatttatcgaccggaagcacgggcgggcgcgtgtggaagtcccg
cacgaggatgtaagaaatattctcagtgacacgtacggcgtcatcgtctatcaagagcag
attatgatgatcgcctcgcgcatggcaggtttttcattaggtgaagcggatctgctcaga
cgggctgtcagcaaaaagcaaaaggacattttggacagagagcgaagccattttgttgaa
gggtgcttaaaaaaggagtattctgtagtcactgcaaacgaggtctacgatctgattgtc
aaattcgctaactacggattcaacagaagccatgctgtcgcatacagcatgatcggctat
cagctcgcctatttaaaagctcactatcctttatattttatgtgcgggcttttgacgagc
gtcatcggcaatgaggacaaaatatcgcaatatctgcacgaagcaaaggggagcgggctc
caagtccttccgccgtctgtcaataagagcggttttccgtttgcacctgaaaacggcgcc
gtcagatacagtttgcgggccataaaaaacgtaggcgtctcggcagtgaaagatatttat
aaagcaagaacacataaaccgttcgaggatcttttcgatttctgctttcgcgttcctgcc
aaaagcgttaatcggaaaacaatcgaagcccttatattttctggcgccatggacgaattc
aatcaaaatcgcgccgccttgctggcctccgttgatgtggctttagagcacgctgagctt
tttcgtgcagacgatgaccaaatgggattgtttttggaagaatcgttctccattaagcca
aaatatgtagaggcagaggaatttccgctcgtggacaagcttcggtttgaaaaagaagct
ctcggtgtttatttctcaagccatcctttgtcagctttcaggaatctcttgaaaaaacgg
ggggcgcaagcgatcgcaacagcgctgcagatgccgaaaggacagctgtcaatcggcgct
ttgctcgcaggcatcaaaacgattcggacaaagacaggtcagcatatggcgtttctcaca
ttaagcgacgaaacgggagaaatggaagccgtcgtgtttcctgaccaatatagaaggctg
tctccgctgttaaaagaaggcgcgcttttattcgcgtccggaaaaatggaagagcggcag
gagaagatacaatttattatgtcatccgcctctctccttgagcagacggaggcagacaga
gcgccgtctgtttacatcaaaatcgaaggcagccggcacaatcaggagtttctggaaaag
atgaagcgtattttactggagcataaaggggaaaccggcgtttatctttattacgaaaag
gacaagcagaccatcaggctgcccgatacttttcatattcaggccgaccatcaggcgtta
taccgtttaaaagagctgctgggccgcgaaaacgtcgtgttaaaatag
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