Bacillus amyloliquefaciens DSM 7: BAMF_3356
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Entry
BAMF_3356 CDS
T01321
Symbol
uvrB
Name
(GenBank) excinuclease ABC (subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAMF_3356 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_3356 (uvrB)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAMF_3356 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAMF_3356 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
CDT1
DUF87
AAA_30
AAA_7
AAA_22
AAA
AAA_16
AAA_19
AAA_25
P-loop_SecA
TrwB_AAD_bind
AAA_5
UFL1
HEM4
UB2H
AAA_6
EAD4
Motif
Other DBs
NCBI-ProteinID:
CBI44482
UniProt:
A0A9P1NJ26
LinkDB
All DBs
Position
complement(3411900..3413885)
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AA seq
661 aa
AA seq
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MKDRFELVSKYQPQGDQPQAIEKLVKGIQEGRKHQTLLGATGTGKTFTVSNLIKEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYREMVVSLRPEMEIERNELLRKLVDIQ
YARNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAILNIEQELEERLKVMRENGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQV
LVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYEIEHTPEMIEQIIRPTGLLDP
LIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKHDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNAEGRVIMYADKITHSMEIAINETKRRREQQERFNEIHGITPQTINKEIRDVIRATQ
AAEDKEEYKTKAAPKLAKMTKKERQKVVEQMEHEMKEAARALDFERAAELRDLLLELKAE
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatcgttttgagttagtctcgaaatatcagccccagggagatcagccgcaagcg
attgagaagcttgtcaaaggcatacaggaaggcagaaaacaccagactctcctgggcgcg
acagggacgggcaaaacctttaccgtgtccaatttgattaaagaagtcaacaagccgaca
ctggtcattgcccataacaaaacccttgccggacagctgtacagcgagtttaaggagttt
tttccgaacaacgctgtcgaatactttgtcagctactacgattactatcagccggaggcg
tatgtgcctcagacggatacatttatagagaaagacgcaagcattaacgatgaaattgat
aaactgagacactccgccacatcctctctgtttgaacggagagatgtcattattatcgcg
agtgtatcatgcatatacggtctcggttcgcctgaagaataccgggaaatggtcgtgtcg
ctcagaccggaaatggagattgagcgaaatgagctgctgagaaagcttgtggatatccag
tatgcccgcaatgatatcgactttcagcgggggacgttccgcgtgcgcggagacgttgtg
gaaatcttcccggcttcccgtgacgaacattgtatcagagtggaatttttcggtgatgaa
attgagcggatcagagaggttgacgctttgaccggagaaattctcggcgaccgcgatcat
gtcgcgattttcccggcttcccacttcgtcacacgggcggaaaagatggaaaaagcgatt
ctgaatattgaacaggagcttgaggagcgcttaaaagtcatgcgcgaaaacggcaagctt
ctggaagcccagcgccttgagcagcgtacgagatatgatcttgaaatgatgcgggaaatg
ggtttctgctcggggatcgagaactattcaagacacttgacgctccgtcctccgggctcc
acgccgtatacgctgcttgattattttccggatgattttatgattgtcgttgatgaatca
cacgtgacgattccgcaggtgcgcggcatgttcaacggtgaccaggcaagaaaacaggtg
cttgtcgatcacgggttccgcctgccgtcagcgcttgacaaccgtccgcttcgattcgag
gaatttgaaaagcacatgcacaatatcgtgtacgtctctgctaccccgggaccgtatgaa
attgagcatacgccggaaatgatcgagcagatcatcaggccgacgggacttctcgatcct
ctcattgatgtccgtccgatcgaagggcagattgatgatctgatcggtgagattcaggcg
aggattgaacgtaatgaacgcgtgctcgtgacgactttaacaaaaaaaatgtcagaggac
ctgaccgattatctgaaggaaatcggtatcaaggtcaattatcttcattcagagattaag
acgcttgaacggattgaaatcatccgtgacctccgcctcgggaaacatgatgtgttaatc
ggcatcaacctgctgagggaagggcttgatattccggaagtgtcacttgtcgccattctg
gatgcggataaagaaggcttccttcgttccgagcggtcgctgattcagacgatcggacgg
gcggcccggaacgcagagggacgcgtcatcatgtatgccgataaaatcacgcattcgatg
gaaattgcgattaatgaaacgaagcgccggcgggaacagcaggagcgctttaacgaaatc
cacggcattacgccgcaaacgatcaataaggaaatccgcgatgtgatccgcgcgacgcag
gccgctgaggataaagaagaatataaaacaaaagccgctcctaagctggcgaagatgacg
aagaaagaacgccagaaagtcgttgagcaaatggagcacgaaatgaaagaagcggccaga
gcgcttgatttcgaacgggcggcagagcttcgtgatttactgttagagctaaaagcggaa
ggatga
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