Bartonella apihabitans: BBC0178_000060
Help
Entry
BBC0178_000060 CDS
T08729
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bapa
Bartonella apihabitans
Pathway
bapa03030
DNA replication
bapa03410
Base excision repair
bapa03420
Nucleotide excision repair
bapa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBC0178_000060
03410 Base excision repair
BBC0178_000060
03420 Nucleotide excision repair
BBC0178_000060
03440 Homologous recombination
BBC0178_000060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapa03032
]
BBC0178_000060
03400 DNA repair and recombination proteins [BR:
bapa03400
]
BBC0178_000060
Enzymes [BR:
bapa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBC0178_000060
DNA replication proteins [BR:
bapa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBC0178_000060
DNA repair and recombination proteins [BR:
bapa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBC0178_000060
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBC0178_000060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
DNA_polI_exo1
HHH_2
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AQT41514
UniProt:
A0A1U9M873
LinkDB
All DBs
Position
4619..7567
Genome browser
AA seq
982 aa
AA seq
DB search
MQKNDHLFLVDGSSYIFRAYHALPPLTRKKDGLPVGALAGFCNMLWKLLCDARDTAVGVV
PTHFAVIFDYSSETFRKKIYPEYKANRPTPPDDLIPQFSLIRQATRAFNLPCIEKEGYEA
DDIIATYASEATRSGAKTTIISSDKDLMQLVNQQVGMYDGMKDRPIGVAEVIEKWGVPPE
KMIDLQSLTGDSTDNVPGVPGIGPKTAAQLLDEFGDLDTLLAHAGDIKQQKRRENIIEFA
DQARLARQLVTLKTDVPLETGLDGLLLEPTDGPRLIGFLKAMEFNSLTRRVAEATNCDAA
LIEPVELDVEWGKSAHGPDLEAGSDVGGEPDVRGNGQQEQKSDSDDSQENTPQLLAEKRK
KEALTEKIDTTAYHTITDEAELKQWLDRALDQGFFAFDTETTSLDPMQAELVGFSIGLKP
GEAAYVPLNHVDGSNDLLGGGRLKGQIDTQKAVALLKPVLENPAILKIAQNMKYDWLVMR
QYHVTIRSFDDTMLLSYVLDAGTLTHGMDALSERWLGHKPITFKEVAGSGKTATGFAAVD
LKRATQYAAEDADVTLRLWRVLKPQIVARGVTRVYERLERPLVTVLARMEERGVLVDRQL
LSRLSGELAQSAAALEDEIYQLAGEKFNIGSPKQLGEILFGKMGLPGGSKTKTGQWSTSA
QVLEDLAAEGHELPRKIVDWRQLTKLKSTYTDALPNYILPETGRVHTNYSMAATSTGRLA
SSDPNLQNIPVRTPEGRKIRAAFIAGPGNLLLSADYSQIELRVLAHVADIKALKKAFADG
LDIHAMTASEMFGVPIEGMPPEVRRRAKAINFGIIYGISAFGLANQLSIPREEAAQYIRT
YFERFPGIKDYMEKTKAFAHEHGFVETIFGRRAHYPDINSKSAQVRAFNERAAINAPIQG
AAADIIRRAMIKMDDALKEAGLSAKMLLQVHDELIFELPENEVEKTTALVKNVMENATMP
ALSLSVPLKVDARAAKNWDEAH
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatgatcacctttttctcgttgacggttcaagctatatctttcgcgcctat
catgccttgccgccattaacacggaaaaaagacggtttgccggttggcgcgctggccggt
ttttgcaatatgctgtggaaattgctgtgcgatgcgcgtgatactgcagttggcgtcgtg
ccaacgcattttgctgtcatttttgattattcgtcggaaacattccggaaaaagatatat
cccgaatataaagcgaaccgccctactccgcccgacgatcttattccccaattcagcctt
atcagacaggcaacccgcgctttcaacctgccatgcattgaaaaagaaggttatgaggca
gacgacattattgcaacttatgcgtctgaggccacccgaagtggtgcgaaaaccacaatc
atttcttccgacaaagacctcatgcaactcgtcaatcaacaggtcgggatgtatgacggt
atgaaagaccgtccgatcggcgttgcggaagtgatcgaaaaatggggcgttccgccggaa
aagatgattgatttgcaatcgcttaccggtgattccaccgataatgttccaggtgtgccg
ggtattggcccgaaaacggcagcccagcttcttgacgaattcggcgatcttgatacgctt
ttggctcatgccggcgacattaaacaacaaaaacgtcgtgaaaatattatcgaatttgcc
gatcaggcaagattggcacgtcagcttgtaacattaaaaaccgatgttccgcttgaaacc
ggtcttgatggcctcctgttggaaccaaccgacgggccgcggcttatcggctttttgaaa
gcaatggaattcaattccttgacgcgtcgtgttgcagaagcgaccaattgtgatgcggct
ttgatcgagccggtggagcttgatgtggaatggggcaagagtgcccatgggcctgatctc
gaagcgggttcggatgtcggcggagagccggacgtgcgtggcaatggtcaacaagaacaa
aaaagtgattctgatgattcacaagaaaacaccccgcagcttcttgcagaaaaacgtaaa
aaagaagctctcacagaaaaaatagatacgaccgcttatcacactataactgacgaagcc
gaattgaaacaatggcttgatcgggcgctcgatcaggggttctttgcatttgataccgaa
acgacctcgcttgaccctatgcaagcggaacttgtcggcttttctataggtcttaaaccc
ggtgaagcggcttatgtgccacttaaccatgtcgatggtagcaatgatttgctgggcggt
ggacgcttaaagggacaaattgatacacaaaaagcggtcgctttattgaagccggtattg
gaaaatccggcgattttaaaaattgcgcaaaatatgaaatatgattggctggtgatgcga
cagtatcatgtcacaatccggtctttcgacgatacgatgttgctttcctatgttctggat
gccggaacattgacccatggaatggacgcattgtccgagcgctggttggggcataagccg
ataacattcaaagaggttgccggaagtggaaaaacggcaactggttttgctgctgtcgat
ttgaaacgggcaacccaatatgcggccgaagatgccgatgttacgttgcgactttggcgg
gttttaaaaccccaaattgtcgcccgcggtgttacccgtgtttatgagcgtctggagcgg
ccattggtgaccgttcttgcccgtatggaagaacgcggtgttctggttgaccggcagtta
ctgtcgcgattatccggtgagcttgcccagtcggcagcagcattggaagatgaaatttat
caacttgccggagaaaaattcaatatcggctcgcccaagcaattgggtgaaatattgttc
ggtaaaatgggtttgccgggaggctcgaaaaccaaaactggccaatggtcgacatcggct
caggttcttgaagatctggcagcagaggggcatgaattaccccgcaagattgttgattgg
cgccagctcacaaaattgaaatcgacctataccgatgcactcccgaattatattttacct
gaaacagggcgcgttcatacgaactattcaatggcggcaacgtcaaccggacggcttgcc
tcgtcagacccgaatttgcaaaatattccggttcgcacaccggagggaagaaaaatccgt
gccgcttttatagccggtcccggaaatttgctactgtctgccgattacagccagattgaa
ctgcgtgttcttgcccatgtcgccgatatcaaagctttgaaaaaagcatttgcagacggc
cttgatattcatgcaatgacagcatcggaaatgttcggtgtgccgatcgagggtatgcca
ccggaagttcgtcgccgtgccaaagcgatcaatttcggcattatttatggcatttccgct
ttcggacttgccaatcaattgtcgattccgcgcgaggaagcagcccaatatatccgcacc
tatttcgaacgttttcccggcattaaagactatatggaaaagaccaaggcttttgcgcat
gagcatggttttgtcgagacaattttcggacggcgtgcacattatccggatatcaattcc
aaaagtgcacaagtgcgggcttttaacgagagggctgcaatcaacgcaccaattcagggg
gccgccgccgatattatccgtcgtgccatgataaaaatggatgacgcgctgaaggaagcc
ggcttatcggccaaaatgttgttgcaggttcatgatgaactgatttttgaattgcctgaa
aacgaagttgaaaaaaccaccgcacttgtaaaaaatgtgatggagaatgcgacaatgccg
gctctatccttatctgtgccacttaaagtcgatgcacgcgcagctaaaaattgggatgaa
gcccattaa
DBGET
integrated database retrieval system
