Bartonella apihabitans: BBC0178_001050
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Entry
BBC0178_001050 CDS
T08729
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
bapa
Bartonella apihabitans
Pathway
bapa02020
Two-component system
bapa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBC0178_001050
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBC0178_001050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bapa03021
]
BBC0178_001050
Transcription machinery [BR:
bapa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBC0178_001050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Tnp_ISL3
HTH_22
HTH_31
RWP-RK
Sigma70_r4
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
AQT41613
UniProt:
A0A1U9M8H3
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All DBs
Position
114384..115946
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AA seq
520 aa
AA seq
DB search
MALSPSFELRQSQSLVMTPQLMQSIKLLQMTAAELEHFIEEALEKNPLLERQNGQEFTEK
TDNEAIKNSDAQTNNVFDNSAGAPENFEQNIDSDQNLYETPDPETLSNMFDGGDEAVFSQ
KSSPEHFGEKEYSSDWTTSFIGSSPIEDVNIVETVAYKPGLQDFVAEQIGFAFKNKEEHD
IACYLSSELDEAGYFNGSVDKVADELSVSKTLVHNILKRLQQLDPPGIFATSLCECLSLQ
LERQNRLDPAISVILDNLPLLAKRDFVTLSRLSGLEESEVVDILNEIRSLDPKPGTAYSA
STPIPVVPDVIISENPNGEFTVELNREVLPKLVIHRDYVVKIGKDNVDRSFISNCYQNAN
WLLKALDQRERTLITVSAEIARHQQEFLRRGISFLKPLTLATVAEAVHMHESTISRVTAN
KYVATPRGIFEMRSFFSAALQSTDGGEQYATEAVRQRIRKLIDSETADHVLSDDTLVQLL
KKENIDIARRTVAKYREMMNISSSVLRRREKKRQIHTTTD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtcaccatcttttgagcttcgtcagtcacaatcattggtgatgactccccag
ttgatgcaatcgatcaagcttcttcagatgacggccgcggaacttgaacattttatcgag
gaggctttggaaaaaaatcccttgctcgagcgtcaaaatgggcaagagtttacagaaaaa
accgataatgaagccattaaaaatagtgacgcgcaaaccaataatgttttcgacaattcg
gctggcgcacctgaaaatttcgagcaaaatatcgatagcgatcaaaatctctatgagaca
cctgatccggaaacattatccaatatgttcgatggaggcgatgaggctgtcttttcgcaa
aagtcttcgccagaacattttggggaaaaagaatattcatccgattggacgacttctttc
attggatcttcgccaatcgaagatgtgaatattgtcgaaacggttgcatataaacctggc
ttgcaggattttgttgccgagcaaatcggctttgcattcaaaaataaagaggagcacgat
attgcttgctacctttcttccgaacttgatgaagcgggatattttaacggttcggttgat
aaggtagctgatgaattgtcagtttcaaaaacattggttcacaatattctgaaacgttta
caacagctcgacccgccgggcatatttgctacttcactttgcgaatgtttgtcattgcaa
cttgaacggcaaaaccggcttgatccggcaatcagtgtcatacttgataatctcccgctt
ttggccaaacgtgattttgtcacgctttccagactttccggtctcgaagaaagcgaagta
gtcgatatattgaacgagattcgcagcctcgatcccaaaccggggacagcttatagcgca
tcgacaccaatccctgtcgtgcctgatgtgattatttccgagaatccgaatggagaattt
accgttgaactcaatcgcgaggtattgccaaaacttgttattcatcgcgattatgtcgtc
aaaatcggcaaggacaatgttgatcgcagtttcatcagtaattgctaccagaatgccaac
tggttgctcaaagcactcgatcagcgtgaacgcacactcatcacagtcagtgcagaaatt
gcccgtcaccagcaagaatttttgcgtcggggcatttcttttttgaaacctctcacgctg
gcaacagtagccgaagcggttcacatgcatgaatcgactataagtcgggtaactgccaat
aaatatgtggcaactccgcgaggcattttcgaaatgcgcagctttttttcagcggctctg
caatccacagatggcggggaacagtatgcaaccgaagcggtacgtcagcgtattcgcaaa
ttgatcgacagcgaaactgccgatcatgtgctttccgatgatacacttgtccaattgctc
aaaaaagagaatatcgatatagctcgtcgcaccgtagccaaatatagagaaatgatgaat
atttcatcttcagtattgcggcgtagagaaaagaaacgccagattcacacaactacagat
tga
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