Bartonella apihabitans: BBC0178_001380
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Entry
BBC0178_001380 CDS
T08729
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bapa
Bartonella apihabitans
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapa03400
]
BBC0178_001380
Enzymes [BR:
bapa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBC0178_001380
DNA repair and recombination proteins [BR:
bapa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BBC0178_001380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AQT41646
UniProt:
A0A1U9M8L2
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All DBs
Position
160633..164115
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AA seq
1160 aa
AA seq
DB search
MTKREIPEDAIKNQTAASNPQSSAWVSANAGSGKTHVLTFRVIRLLLNGTEPARILCLTY
TKAAAAVMQTRIFQTLSGWTELDDDKLTEVLIALEGKKPDTKRLDEARRLFARALETPGG
LKIQTIHAFCEGLLHQFPLEANIAGHFEMMDDLKRDEFFKNARRDLLEKAYLQKNSSLHD
ALMLVLKTAGENGLFTLLDEAIEKRQALRAFLTRVSGPDGKHILEKALQISPEDTEENLT
DEIRKTALHSEETIEAFKSLGHSFAQDFVERLELVEKADNSESIKFIELAYFTRGNPRKI
SNLASKKLLAALPWLADDLLKRQEKLASYLDKLRRVRLVRLNLAAFKLCYRLLARYESLK
KAEGLLDFDDLIERALNLLKRDGAGQWVQYKLDRGIDHILVDEAQDTSPSQWQIIQLLAQ
EFFVGEGQREVNRTVFAVGDEKQSIYSFQGAVPEDFATNGRIIERKAEAVGKSFGHIRLN
YSFRSTADVLKSVDRVFEKPENYKGLSAENIKTVHEPVRRNDPGEVVIWDNIAPTDVEEP
EDWRKPIDQLHAPAVRLAEEIATTISHWLYHHEMLSGQGREVKASDIMVLVRKRDQFVPA
LARALKNRNVPVAGADRLRLASHIAVRDLTALARFVLQPQDDLSLASVLKSPLFGLDEDD
LYHIAINREGSLFNSLEAHSEEKPEFATVLALLKKYRNLADKTPVYEFYSHILSEDQGRA
KILARLGSEASDVLDAFMDYTLSIQKTGLPGLQAFLETIKLSDPEIKRELDQNREEVRIM
TVHAAKGLESAIVFLVDSGSRIWNAQHEPKFIEIDDHGEKSFLWQPAKEFKTSFGDNYIN
TLKLKAEEEYRRLLYVGMTRAEDRLIVCGYQGKNVVSGTWSELVGEALKPVSEEIAGPSP
DIKAWRYCVDDNRTSVETKTAEDEAVVPAFPLPSYFHRRMEPETDLPKPLTPSGASLDID
ENAPAAKNNVTISPVLGEKPANSSFAIERGTIIHRLLQYLPQIKEEDRQRLARAYLEKAA
PEWSEEQRADAFEQTFKVMDDEALRPLFTKEARAEVTLMGTVTIRGKKYVVSGQIDRLND
GDDTIVLGDFKTGRAPKREQQIPDSYMLQMALYRTLLMSIHPDKTVRTLLIYSDGPKVFE
LDGKKLDFIINKEKTNSPEQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacgcgaaattcctgaagatgccattaaaaatcagacggccgcttcaaatccg
caaagcagtgcgtgggtgtctgccaatgccggctccggcaaaacccatgttttgacgttt
cgggttataaggcttttattgaatggcaccgaaccggcgcggattttgtgcctcacttat
accaaagcggccgctgctgtcatgcaaacgcgcattttccagactctttccggctggaca
gagcttgacgatgacaaattgacagaggtgttgatcgcgcttgagggtaaaaaacccgat
actaaaaggcttgacgaagcgcgtagactttttgcccgtgctcttgaaacaccgggcggg
ttaaaaatccagacgatccatgctttttgtgaaggcctgcttcaccaatttcctttggaa
gccaatatcgccggccatttcgagatgatggacgatctcaagcgtgacgagtttttcaaa
aatgcgcgccgtgacttgcttgaaaaagcttatttgcaaaaaaatagttctcttcatgac
gcattgatgctggttttgaaaacagcaggagaaaatggactttttacgctgttagacgaa
gcaattgaaaaacggcaggctttaagggcgtttctcacgcgtgtgagtggaccggatggc
aagcatattctggaaaaagcattacaaatatctccggaagatacggaagaaaatctcact
gatgaaatccgtaaaacggcgcttcattcggaggagactattgaggcattcaaaagtctc
ggccactctttcgcccaagattttgttgaaagattggagcttgtagaaaaggcggataat
agcgagagcataaaatttatcgaacttgcctattttacccgtggaaatccgcgaaaaata
agcaatttggcatcaaaaaaacttcttgcagctttgccatggcttgcagacgatttgtta
aagcgtcaggaaaagctcgcttcctatctcgacaagttgcgacgtgtacgactggtacgg
ctcaatttggcagccttcaagctctgttaccggcttttggcgcgttatgaaagtttgaag
aaagcggaaggtttgcttgatttcgatgatttgatcgagcgggcgcttaatctgttaaaa
cgcgacggtgcaggccaatgggtacaatataaactggataggggcattgaccatattctg
gttgacgaagcacaggatacaagcccttcccagtggcaaataatccagcttcttgcacag
gaattttttgtcggggaaggacaaagagaggtcaatcgcactgtttttgccgttggtgac
gaaaaacagtcgatctattccttccaaggcgctgtaccggaagattttgcaacgaatggt
cgcattatcgaaagaaaagccgaagccgttggcaagtctttcggccacatacgtttgaat
tattccttccgttcgactgccgatgttttaaaaagtgttgatcgggtatttgaaaaacct
gaaaattataaaggtctttcagccgaaaatatcaaaaccgtgcatgagccggttcgccgc
aatgacccgggtgaagtggtgatctgggacaatattgcgccgaccgatgtagaagaaccg
gaagactggcgcaaacctattgaccagcttcatgcaccggctgttcgccttgccgaagaa
atagcaacgacgatcagccattggctttatcatcatgaaatgctttctggtcagggaaga
gaagttaaagccagtgatattatggtgctggtgagaaaacgcgaccagtttgttccggct
ttggcgcgcgcattgaaaaaccgcaatgttccggttgccggtgccgaccgcttgcgtctg
gcgagccatattgccgtgcgtgatttaacggcgcttgcccgatttgttctgcaaccgcag
gatgacctttctctcgcatccgttttgaaaagcccgcttttcggacttgatgaagatgat
ctttatcatattgctataaaccgtgaaggaagcctgtttaatagccttgaagcccatagt
gaagagaagcccgaatttgcaactgttctggctttactcaaaaaatatagaaacctcgcc
gataaaacgcctgtctatgaattttatagccatatattgagcgaagatcagggacgagca
aaaattctcgcccgattgggttcggaagcaagcgatgtccttgatgcgttcatggattat
accttatccatccagaaaaccggtttgcccggtttgcaggcttttctggaaacaatcaag
ctttccgatccggaaatcaaacgtgaactcgaccagaaccgtgaagaagtccgtattatg
actgttcatgcggcaaaagggcttgaaagcgccattgtctttctggtcgattccggttcg
cgtatctggaacgcgcaacatgaaccgaaattcatcgaaattgatgatcatggcgagaag
agctttttgtggcagcccgccaaggagttcaaaacatcattcggtgacaattatatcaat
acgttaaaattaaaagccgaagaagaatataggcgccttctttatgttggcatgacacgg
gcagaagaccgccttattgtttgtggttatcagggaaagaatgttgttagcgggacatgg
agtgaacttgtcggtgaagcattgaagccggtttcggaagaaattgccggaccttcaccc
gacatcaaggcatggcgttattgcgtggatgacaaccgcacaagtgttgaaacaaaaact
gcggaagatgaagcagtcgttccggcttttccgcttccttcctatttccatagacgtatg
gaaccggaaaccgatttacctaagccgcttaccccttcaggtgcttcacttgacattgac
gagaatgcaccggcggcaaaaaataatgttacgatttcgccggttctgggagaaaaaccg
gcaaattcttcatttgctatcgaacgggggacgatcattcaccggcttttgcagtatttg
ccgcaaataaaggaggaagacaggcaaaggcttgcccgtgcctatcttgaaaaagcagca
cctgaatggagcgaggaacaaagagcggatgcttttgaacaaaccttcaaggttatggat
gatgaagcactgcgccccttgtttaccaaagaagcgcgtgccgaagtgacattgatggga
actgtcacaataaggggtaaaaaatacgttgtttccggacaaatagaccgcctcaatgat
ggcgatgacacgattgttctgggagatttcaaaaccggtcgtgcgccaaaacgcgagcag
caaattcccgacagctacatgttgcaaatggcactttaccggacgctattgatgagcatt
catccggataagaccgttagaacattgttgatctatagtgacggaccaaaagtttttgaa
ctcgacggcaaaaaactcgatttcattatcaataaagaaaaaactaattcaccggaacaa
taa
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