Bartonella apihabitans: BBC0178_001620
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Entry
BBC0178_001620 CDS
T08729
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bapa
Bartonella apihabitans
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bapa03016
]
BBC0178_001620
Enzymes [BR:
bapa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BBC0178_001620
Transfer RNA biogenesis [BR:
bapa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBC0178_001620
Prokaryotic type
BBC0178_001620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
IGF2_C
Motif
Other DBs
NCBI-ProteinID:
AQT41670
UniProt:
A0A1U9M864
LinkDB
All DBs
Position
complement(185469..186212)
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AA seq
247 aa
AA seq
DB search
MARFKLTIEYDGTNYCGWQRQDGLRTVQAAIEEAVFAFSGEKVTIFGAGRTDAGVHATGQ
VAHVDLEKNIRADRLRDAINAHLTLNKENVAILQSEEADADFDARFSARKRHYHFIILNR
RAPAVLKANRVWWVPKKLDAEKMDEAAKRLLGLHDFTTFRSSECQAKSPVKTLDQLDVER
IGEEIHIYASARSFLHNQIRSFAGSLMEVGVGRWSADDLEDALNAKNRARCGMVAPPSGL
YLTKVDY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtttcaaattaacaattgaatatgacgggacaaattattgcggttggcaaaga
caggatggcttaagaaccgttcaagctgccattgaagaagccgtttttgcgttttcaggt
gaaaaagtgacaattttcggtgcaggtcgtaccgatgccggtgtccatgcgacaggtcag
gttgctcatgtcgaccttgaaaaaaatattcgagccgaccgtttacgggatgccattaac
gcgcatttgacccttaacaaagaaaatgtcgctatcttgcaatcggaagaagcagatgcc
gatttcgatgcgcgtttttctgcacgaaagcgtcactatcacttcattattttgaataga
cgggcgccagcggtcctcaaagcaaaccgcgtctggtgggtgcccaaaaaacttgatgcc
gaaaaaatggacgaagcggcaaaacgacttttgggacttcatgacttcaccactttccgc
tccagcgaatgccaagccaaaagccctgtaaaaaccctcgaccagcttgatgttgaacgt
atcggcgaagagattcatatttatgcaagcgcccgttcttttcttcataaccagatacgc
tcttttgccggaagcttgatggaagtgggcgtcggtcgctggagtgcggatgaccttgaa
gatgcattgaatgccaaaaatcgcgcccgctgcggtatggttgcgcctccatccggactt
tatctgacaaaagtagattattaa
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