Bartonella apihabitans: BBC0178_002940
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Entry
BBC0178_002940 CDS
T08729
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bapa
Bartonella apihabitans
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bapa03016
]
BBC0178_002940
Enzymes [BR:
bapa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBC0178_002940
Transfer RNA biogenesis [BR:
bapa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBC0178_002940
Prokaryotic type
BBC0178_002940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AQT41800
UniProt:
A0A1U9M8H8
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All DBs
Position
338752..339714
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AA seq
320 aa
AA seq
DB search
MARQRKKKGRPVSGWVILDKPEGMGSTEAVSKIKWLFQAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVVDGTKVYRFTVAWGEEHNTDDMEGVVTKTSTKRPGKDEIISILPHYIGTI
LQTPPQFSAIKIDGNRAYDLAREGEKIEIPPREVEIDSLELIDMTPEGHAIFEVECGKGT
YVRALARDMGRELGCYGYIANLRRIEVSPFVEDDFVSLEDLEDAAPERGEADENGIYPSC
DFSALDELLIETGAALEFLPQYPLSDEQAYRVRMGNPVLMRGRGAPVDEDEVCATYKGKL
LAIGMIEKGQFKPKRVFTTG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcagcgaaagaaaaagggccgtccggtttcgggctgggttattcttgataag
ccggagggtatggggtcgaccgaggctgtttcaaaaatcaaatggctgtttcaggcggag
aaagccggtcacgcgggaacccttgacccgcttgcttcgggcatgttgccaattgccttg
ggagaagccacaaaaactgttccctatgttgtcgatggtacaaaagtttaccgctttacc
gttgcgtggggggaagaacacaataccgatgatatggaaggcgtcgtgacaaaaacgtct
accaaacgcccgggtaaagacgaaataatatcgattttacctcattatattggcacaatt
cttcaaaccccgccgcaattttcggcaatcaagattgatggcaatcgtgcttatgatctg
gcacgggaaggtgaaaaaatcgaaattccgccacgtgaagttgaaatcgatagcctcgag
ttgattgatatgacaccggaaggccatgcgattttcgaggtggagtgtggtaaagggact
tatgtccgtgctcttgcccgcgatatgggaagagaacttggatgctatggctatattgcc
aatttgcgtcgtatcgaagtttcgccttttgtcgaagatgattttgtgagccttgaagat
ttggaagacgccgcgccggaaagaggcgaggccgacgagaatggcatttatccgtcatgc
gatttttccgcacttgacgaacttctgatcgaaaccggtgcggcgctcgaatttctgccg
caatatccgttaagcgacgagcaggcttatcgtgtgcgaatgggaaacccggttttaatg
cgtggacgaggtgcccccgttgacgaagatgaggtttgtgcgacgtataagggtaaatta
ttggcaatcggcatgatcgaaaaaggccagttcaagcccaagcgcgttttcacaaccggc
tga
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