Bartonella apihabitans: BBC0178_008110
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Entry
BBC0178_008110 CDS
T08729
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bapa
Bartonella apihabitans
Pathway
bapa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBC0178_008110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bapa03021
]
BBC0178_008110
03400 DNA repair and recombination proteins [BR:
bapa03400
]
BBC0178_008110
Enzymes [BR:
bapa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBC0178_008110
Transcription machinery [BR:
bapa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBC0178_008110
DNA repair and recombination proteins [BR:
bapa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBC0178_008110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
AQT42302
UniProt:
A0A1U9M9X9
LinkDB
All DBs
Position
912951..913355
Genome browser
AA seq
134 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLAAHRARQISQGAQITVDRDNDKNPVVALREIADETLSP
ADLKEDLIHSLQKHVEVDEPEPEPALIGHSEEANDVFGSNGEKSDDKVSFDHMSEDELLA
GIEGLVAPEKNDDY
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttacggtagaagattgtattgataaggttgataaccgctttgaactggtg
cttttggcagcccatcgtgcgcgccaaatatcgcaaggcgcacagatcactgtagatcga
gacaatgacaaaaatcctgttgtggctttgcgcgaaattgctgacgagacattgtcaccg
gcagatctcaaggaagatctcatccactcgttgcaaaagcatgtcgaagtggacgagcca
gagccggaaccggctttgattggtcatagcgaagaggccaatgatgtattcggttcgaat
ggcgaaaagtcggacgacaaggtttcattcgatcatatgtcggaagatgaacttcttgcc
ggtattgaaggcttggtcgctccggaaaaaaatgacgactattga
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