Ditibartonella apihabitans: BBC0178_014060
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Entry
BBC0178_014060 CDS
T08729
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bapa
Ditibartonella apihabitans
Pathway
bapa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBC0178_014060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bapa03021
]
BBC0178_014060
03400 DNA repair and recombination proteins [BR:
bapa03400
]
BBC0178_014060
Enzymes [BR:
bapa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBC0178_014060
Transcription machinery [BR:
bapa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBC0178_014060
DNA repair and recombination proteins [BR:
bapa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBC0178_014060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
AQT42871
UniProt:
A0A1U9MBP5
LinkDB
All DBs
Position
complement(1554504..1555517)
Genome browser
AA seq
337 aa
AA seq
DB search
MIQKNWQELIKPNKVEFQTQGGSNKAIVIAEPLERGFGLTLGNALRRVLLSSLRGAAITA
VQIDGVLHEFSSIPGVREDVTDIILNIKEIAIRMEGEGPKRMVVRKEGPGVVTAGDIQTV
GDVEILNPEHVICTLDQGAEIRMEFTVNTGKGYVPADRNRNEDAPIGLIPVDSLYSPIRK
VSYKIENTREGQVLDYDKLILTVETNGAVTAEDAVAFAARILQDQLSVFVNFEEPQKEAP
QEQVSELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSL
NEIKEVLASMGLHLGMEIPAWPPENIDDLAKRYEDQY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaactggcaggaactgattaagcctaataaagtcgagtttcaaacgcaa
ggtggttcaaataaagctattgtaattgctgaaccgttggaacgcggctttggtttaaca
ttaggtaacgctttacggcgtgtattactgtcttctttgcggggtgcggctatcacagct
gtacagatcgacggtgtgttgcatgaattttcgtcaataccgggcgtgcgggaagatgtc
actgatattattttgaatatcaaagagattgccatccgcatggaaggtgagggaccaaaa
cgcatggtcgtccgtaaagaagggccgggtgtcgtcacagccggtgatatccagacggta
ggcgatgtggaaatcctcaatccggagcatgttatctgcacacttgatcagggcgcagaa
atccgtatggaattcacagtgaatacgggtaagggctatgtcccggcagatcgcaaccgt
aatgaagatgctccaatcggacttattccggttgatagcctttattcgccaattcgcaag
gtttcttataagatcgagaatacccgtgaaggtcaggttcttgactacgataaattgatc
ctgacggttgaaacgaatggtgcggtcacggcagaagatgctgttgcttttgctgctcgt
attctacaggaccaactttcggtattcgtcaatttcgaagaaccccagaaagaggctccg
caagagcaggtctccgaacttgcattcaatccggccttgctcaagaaggtggatgagctg
gaactttcagttcgttctgccaattgtcttaaaaatgacaatatcgtttatattggcgac
cttatccagaaaacggaagcagaaatgctgcgtactcctaattttggtcgtaagtcgctc
aatgaaatcaaggaagttcttgcatctatggggcttcatcttggtatggaaatccccgct
tggccgcctgaaaatatcgacgacctcgcaaaacgttatgaagatcaatactga
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