Bartonella apihabitans: BBC0178_014600
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Entry
BBC0178_014600 CDS
T08729
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bapa
Bartonella apihabitans
Pathway
bapa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBC0178_014600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bapa03019
]
BBC0178_014600
Enzymes [BR:
bapa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBC0178_014600
Messenger RNA biogenesis [BR:
bapa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBC0178_014600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AQT42923
UniProt:
A0A1U9MC67
LinkDB
All DBs
Position
complement(1601121..1602644)
Genome browser
AA seq
507 aa
AA seq
DB search
MAGKDFILKTQNSNAFEALGVSPILAKNLLKAGMTEPKPIQEEAIPSMLADCDILGIAQT
GSGKTLAFGLPVLTKILSMGDKRRPKTARALILAPTRELAVQIEEAIHMVSKNTHLSTCL
ILGGVSKNSQIKRMAQGVDVLIATPGRLMDLVRDKSVDLSRTDYLVLDEADRMLDMGFIK
DVRRIADLVAKGRQTALFSATMPREIEKLAETLLHDPVHVEVAKQGTTAAEINQVVHKVD
RRNKKDVLNKLLTNPALSSVIVFTRTKHGADAVTRNLSKTGYSVAAIHGNKSQNARQKAL
KGFRDGTVRILVATDIAARGIDVPGISHVINYELPDEAESYVHRIGRTGRNGAHGEAITL
YDESIESARLKAVERVIRMKLPREDVPPQFGPLPEKVENKQGKDKTDSSDEARSQKHKKD
GTFHEKNRTHRRKPVSGKSSGTMTRDDEQALSGDRQKSFKRRNRNNDARKNRETLEARNE
KPVSTKRKKPNNRKKPVRLRKSVRRAA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtggcagggaaagattttattttgaaaacacaaaattcgaatgccttcgaggcattgggt
gtatcgcctattctcgctaaaaatcttctgaaagccggcatgaccgagcctaaacctatt
caggaagaagctattccttcaatgcttgccgattgtgacattttaggtattgcgcaaacc
ggttcgggaaaaacattggcgttcggtctgccggttttaacaaaaatcctttcaatgggc
gataagcggcgcccgaaaacagctcgcgccttaattctcgctcccacacgtgaacttgcc
gtacagattgaagaggctattcatatggtctcgaaaaatacgcatctttccacttgtctc
attctcgggggcgtttcgaaaaattcgcagatcaagcgcatggcgcaaggtgttgatgtg
ctcattgcaacgcccggacggttgatggatctggtgagggataagagcgtagatctatcc
cgtacagactatctcgttcttgatgaagcagaccgtatgctcgatatgggatttatcaag
gatgtgcgccggattgccgatcttgtggcgaaaggtcgccagacagctttgttctcggca
actatgccgagggaaatcgaaaagcttgcagagacgcttcttcatgatccggttcatgtc
gaagttgcaaaacaggggacaacggctgctgaaatcaatcaggtcgttcataaagtcgat
cgccgtaacaaaaaggatgttcttaacaagcttttgaccaatccggctttaagctcggtg
attgtttttacgcgcacaaaacatggcgcggatgcggtaacgcgcaatctttccaaaacg
ggctattctgttgcagcaattcatggcaacaaatcgcagaatgcacgtcaaaaagccttg
aaaggttttcgtgacggaacagtgcgtattctcgttgcaaccgatattgctgcacggggc
atcgacgttccgggaattagccacgttatcaattacgaacttcctgacgaggctgaaagc
tatgtgcacaggattggacgtaccggacgcaacggcgcgcatggtgaagccattacgctt
tatgacgagagtatcgagagtgcacggcttaaagctgttgaacgtgttattcgcatgaag
ttgccacgtgaagacgttccgccacagtttggtcctttacctgaaaaagtggaaaataaa
caaggtaaagacaagaccgattcctcggatgaggctcgctctcagaaacacaaaaaggac
gggacttttcacgaaaagaatagaacgcatcgccgtaaacctgtttccggaaagtccagc
gggactatgaccagagatgacgaacaggctttgtcgggtgatcgtcaaaaaagcttcaag
cggagaaacagaaataacgatgccagaaaaaatcgtgaaacgctcgaagcacgaaacgag
aaaccggtaagcacaaaaagaaagaagccgaataatcgtaaaaaaccggtaagattaaga
aagtcggtaagacgcgcggcctaa
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