Bartonella apihabitans: BBC0178_015000
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Entry
BBC0178_015000 CDS
T08729
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bapa
Bartonella apihabitans
Pathway
bapa03420
Nucleotide excision repair
bapa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bapa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBC0178_015000
03430 Mismatch repair
BBC0178_015000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapa03400
]
BBC0178_015000
Enzymes [BR:
bapa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBC0178_015000
DNA repair and recombination proteins [BR:
bapa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBC0178_015000
MMR (mismatch excision repair)
Other MMR factors
BBC0178_015000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
RhoGAP
Motif
Other DBs
NCBI-ProteinID:
AQT42960
UniProt:
A0A1U9MBR6
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All DBs
Position
1641171..1643654
Genome browser
AA seq
827 aa
AA seq
DB search
MMTDFPDDIPFFDDEPKKPTPQSSAHDEARNGQTGLAERAMAARRNADADADYLKKLNPE
QRLAVTTTEGPVLVLAGAGTGKTRVLTTRIAHILRLGLAYPSQILAVTFTNKAAREMKNR
IGELVGGAVEGMPWLGTFHAIGVKILRRHAELVGLNSNFTILDTDDVIRLIKQLIQAEGL
DDKRWPARTFANMIDGWKNHGLAPDQIPEGDARSFGNGKGRELYRAYQERLQTLNACDFG
DLLMHPIHIFQKNADVLREYHKKFRYILVDEYQDTNTAQYLWLRLLAQRPVGQTVNLCCV
GDDDQSIYGWRGAEIDNILRFEKDFPGATVIRLERNYRSTSHILGAASYLIAHNEGRLGK
TLFTDSKTENDQKVKVHAAWDSEEEARAIGEEIEQLQHHGLALNDIAILVRASFQMREFE
DRFVTLGLNYRVIGGPRFYERQEIRDALAYFRVVTQPADDLAFERIINTPKRGLGEATVR
QIHDTARARNEPMLKASQEMVETDELKPKARSSLRKLVEDFRRWQNMLDNTPHTELAEII
LDESGYTAMWQADRSAEAPGRLENLKELIHSMEDFESLRSFLEHVSLVMDTEKNEDMDAV
NIMTLHSAKGLEFNTVFLPGWEEGLFPHQRSLDEGGRAGLEEERRLAYVGLTRAKENLHI
WFVSNRRIHGLWQSTIPSRFLDELPNEHVEVAEVETSYGGYGQSRFDRQEPFQNNYSTPG
WQRAKKNATEATRTNWGNRSGANVERIGYGEVDSGYGAGRAARSKTIEGELIAKSVSDKP
SEFSVGDRVFHIKFGNGNVAAIDGNKLTIAFDKAGEKRVLDSFVKKV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgattttcctgacgatataccgttttttgatgatgagccgaaaaagccgacg
ccgcaatcttctgcgcacgatgaagctcgtaatggtcaaactggtttggcagaacgcgcc
atggctgcgcgccgtaatgccgatgctgacgccgattatcttaaaaaactcaaccccgaa
caacgccttgctgtaacaacaacggaaggtccggttctggttctggccggtgcaggcacg
ggaaagacgcgggttctgaccacacgcattgcccatattttgcggcttggccttgcttat
ccgagccagattctggcagtcacattcaccaataaagccgcgcgtgaaatgaaaaaccgt
attggtgaactggtcggcggcgcggttgaaggtatgccgtggcttggcactttccacgcg
atcggtgtcaagattcttcgtcgtcacgcggagcttgtggggctcaacagcaatttcacc
attcttgatacagatgatgtaataaggcttatcaaacagctcattcaggctgaagggctt
gacgacaaaagatggccggcgcgcacttttgccaatatgattgacgggtggaaaaaccat
ggccttgcacccgaccagataccggaaggtgatgcccgctcatttggcaatggcaaaggg
cgcgagctttatcgtgcctatcaggaacgtttacaaacgctgaatgcctgtgattttggc
gatttgttgatgcatcccatccatatttttcagaaaaacgccgatgttttgcgcgaatat
cataaaaaattccgctatattctggtcgacgaatatcaggataccaatacagcacaatat
ttatggctgaggctattggcacagcgccccgtcggacaaactgtcaatctttgttgcgtg
ggtgatgacgaccagtcaatttacggctggcgcggtgccgaaattgataatattttgcgt
tttgaaaaagattttcccggtgccactgtcattcgtcttgaacgcaattaccgctcgact
tcgcatattctgggagctgcatcctatctcattgcccataatgaaggccggttgggtaaa
acgctttttaccgatagcaaaacggaaaatgaccagaaggtcaaagtccatgctgcctgg
gattcggaagaagaagcgcgcgctattggtgaagaaatcgagcaattacaacatcatggc
ctagctttgaacgacattgccattcttgttcgcgcctccttccagatgcgtgaatttgaa
gaccggtttgtcacattagggcttaattatcgcgttatcggtggcccgcgtttttatgag
cggcaagaaattcgcgacgcgctcgcctatttccgtgttgttacacaacccgccgatgat
cttgcattcgagcgtattatcaacacgcccaaacgtggccttggcgaagcaaccgttcgt
caaattcatgatacagctcgtgcccgcaatgagcctatgctcaaagcctctcaggaaatg
gtagaaaccgacgaattgaagcccaaggccagaagttctttgagaaaactcgtcgaagat
ttccgccgttggcagaatatgcttgataatactccccataccgaacttgcagaaattatt
ctggatgaatccggctataccgccatgtggcaggctgatcgttctgccgaagctccgggg
cgtcttgaaaacctgaaagagcttatccattccatggaagatttcgagagtttgagaagt
tttcttgaacatgtttcgctggttatggatacagaaaagaacgaagatatggatgcggtc
aatatcatgacactgcattcggccaaggggctggaattcaacaccgtattcttgcccggt
tgggaagaagggctgtttccccatcaacgttcacttgatgaaggcgggcgtgcgggactt
gaagaagagcggcgcctcgcttatgtcgggcttacccgtgcaaaggaaaatctgcatatc
tggtttgtctcgaaccggcgcattcacgggttgtggcaatcaaccattccgtcgcgtttt
cttgatgaactgcctaatgaacatgttgaagttgcagaagtagaaacatcctatggcggt
tatgggcaatcgcgctttgatcgacaggagccgttccagaacaattattcaacacctggc
tggcagagagccaaaaagaatgcaaccgaagcaacgcgcaccaattggggtaaccgctcg
ggcgccaatgttgaacgcatcggttatggggaagtcgattccggctatggtgcaggacgg
gcagcgcgttcgaaaaccatagaaggcgaactcatcgccaaatccgtttccgacaaaccg
tccgaattcagcgtgggcgacagggtttttcatatcaaattcggaaatggcaatgtcgca
gcaattgacggaaacaaactcaccattgcttttgacaaagcaggtgaaaaacgcgtgctc
gacagttttgtcaaaaaagtctga
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