Buchnera aphidicola F009 (Myzus persicae): BUMPF009_CDS00288
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Entry
BUMPF009_CDS00288 CDS
T03020
Symbol
ihfb
Name
(GenBank) Ihfb
KO
K05788
integration host factor subunit beta
Organism
bapf
Buchnera aphidicola F009 (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapf03032
]
BUMPF009_CDS00288 (ihfb)
03036 Chromosome and associated proteins [BR:
bapf03036
]
BUMPF009_CDS00288 (ihfb)
03400 DNA repair and recombination proteins [BR:
bapf03400
]
BUMPF009_CDS00288 (ihfb)
DNA replication proteins [BR:
bapf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BUMPF009_CDS00288 (ihfb)
Chromosome and associated proteins [BR:
bapf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BUMPF009_CDS00288 (ihfb)
DNA repair and recombination proteins [BR:
bapf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BUMPF009_CDS00288 (ihfb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4609
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHG61800
LinkDB
All DBs
Position
complement(342319..342603)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELFEKISKKKIHISNKIIKCAIKEMLEHMTMSLEKGQRIEIRGFGSFSLHYRPSRI
GRNPKTGEIVRLNEKYVPYFKPGKQLRNRTNIYK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcagaattatttgaaaaaatttctaaaaaaaaaattcatatttcaaataag
ataataaaatgtgctataaaagaaatgttagaacacatgacgatgtcattagaaaaaggt
caaagaattgaaattcgagggtttggaagtttttctttgcattatcgtccctctcgtatt
ggtagaaatcctaaaactggagaaatcgtacgattaaatgaaaaatacgtaccttatttt
aaaccaggcaaacaattacgtaatcgaactaatatatataaatag
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