Buchnera aphidicola F009 (Myzus persicae): BUMPF009_CDS00296
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Entry
BUMPF009_CDS00296 CDS
T03020
Symbol
phrb
Name
(GenBank) Phrb
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bapf
Buchnera aphidicola F009 (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapf03400
]
BUMPF009_CDS00296 (phrb)
Enzymes [BR:
bapf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BUMPF009_CDS00296 (phrb)
DNA repair and recombination proteins [BR:
bapf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BUMPF009_CDS00296 (phrb)
Prokaryotic type
BUMPF009_CDS00296 (phrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHG61808
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All DBs
Position
332431..333888
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AA seq
485 aa
AA seq
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MKKNLIWFRNDLRLYDHTALHEACKSDTDKVIALFIATPEEWKKHYISEKKISFMYYNLI
SLEKDLLKLNIILHYHESTNFLKSIQYLMYFCFKHKINNLFYHYQYEFDERNRDFLVKKK
LSQQGVFVQGFHDNLLVSHELIKNKNNKAYKVFSFFKKKITQYLYKNKIPECFSIPLKRK
PDENYCFFNSVSSEKLDFKFDKKIFPVGEIEAFNRLKNFCIYKVNDYSLERNFPFLNSTS
MLSPYLSIGIISSRHCLSMFLKTKINISLNNFFNSSWINQILWREFYYHLLISFPKLSKN
QALVEWENRIDWNNNIKHFNAWKEGNTGFPIVDAGMRQLNELGWMHNRVRMITSNFLVKN
LFIDWRMGEKYFMSHLIDGDLALNNGGWQWSASIGTDSVPYIRILNPLNQSKKFDISGVF
IKKFIPELRNVPNEYIHQPHEWSKKMKCKIDYPDPIINYDDSRKRTLLIFKRVRSYFKKG
LNTHE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatttaatttggtttcgtaacgatcttcgtttatatgatcatacagcttta
catgaagcatgtaaatctgatacagataaagttatagctttatttattgctactccagag
gaatggaagaaacattatatatctgagaaaaaaatatcttttatgtattataatttaata
tctttagaaaaagatttgttaaaattaaacattattttacattatcatgaatccactaat
tttttaaaatcgattcaatatttaatgtatttttgttttaaacataaaataaataactta
ttttatcattatcaatacgaattcgatgaacgtaatcgagattttttagtaaaaaaaaaa
ttatctcaacaaggtgtttttgtacaaggttttcatgataatcttttagtttcacatgaa
ttaataaaaaataaaaacaataaagcatataaagttttttctttttttaaaaaaaaaatc
acacaatatttatataaaaacaaaatacctgaatgtttttctattcctttgaagagaaaa
cctgatgaaaattattgtttttttaattctgtttcttctgaaaaactagattttaaattt
gataaaaaaatttttcctgttggagaaattgaggcttttaatcgattaaaaaatttttgt
atatataaagtaaatgattattcacttgaaagaaattttccttttttaaatagtactagt
atgttatctccatatttatctatagggataatatcatctagacattgtctttcgatgttt
ttaaaaacaaaaatcaacatttcattaaataatttttttaattcttcttggataaaccaa
atattatggcgtgaattttattatcatttattaatttcctttccaaaattaagtaaaaat
caagcactagttgaatgggaaaatagaattgattggaataataatataaaacattttaat
gcttggaaggaaggtaatactggatttcctatcgtagatgctggaatgagacaactgaac
gaattaggttggatgcataatagagtaagaatgattacatctaattttttagttaaaaat
ctttttattgactggagaatgggtgagaaatattttatgtctcatttaattgacggagat
ttggcattaaacaatggaggatggcaatggtcagcatctattggtactgattctgtacct
tatataagaatattaaatccattaaatcaatctaaaaaatttgatatttcaggtgtattt
ataaaaaaattcattccagaattaagaaatgtacctaatgagtatattcatcaaccgcat
gaatggtctaagaaaatgaaatgtaaaatagactatcctgatccaatcataaattacgac
gatagtagaaaaagaactctcttaatatttaagagagtacgttcatattttaaaaaagga
ttaaatactcatgaataa
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