Buchnera aphidicola G002 (Myzus persicae): BUMPG002_CDS00289
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Entry
BUMPG002_CDS00289 CDS
T03021
Symbol
ihfb
Name
(GenBank) Ihfb
KO
K05788
integration host factor subunit beta
Organism
bapg
Buchnera aphidicola G002 (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapg03032
]
BUMPG002_CDS00289 (ihfb)
03036 Chromosome and associated proteins [BR:
bapg03036
]
BUMPG002_CDS00289 (ihfb)
03400 DNA repair and recombination proteins [BR:
bapg03400
]
BUMPG002_CDS00289 (ihfb)
DNA replication proteins [BR:
bapg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BUMPG002_CDS00289 (ihfb)
Chromosome and associated proteins [BR:
bapg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BUMPG002_CDS00289 (ihfb)
DNA repair and recombination proteins [BR:
bapg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BUMPG002_CDS00289 (ihfb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4609
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHG61227
LinkDB
All DBs
Position
complement(342329..342613)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELFEKISKKKIHISNKIIKCAIKEMLEHMTMSLEKGQRIEIRGFGSFSLHYRPSRI
GRNPKTGEIVRLNEKYVPYFKPGKQLRNRTNIYK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcagaattatttgaaaaaatttctaaaaaaaaaattcatatttcaaataag
ataataaaatgtgctataaaagaaatgttagaacacatgacgatgtcattagaaaaaggt
caaagaattgaaattcgagggtttggaagtttttctttgcattatcgtccctctcgtatt
ggtagaaatcctaaaactggagaaatcgtacgattaaatgaaaaatacgtaccttatttt
aaaccaggcaaacaattacgtaatcgaactaatatatataaatag
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