KEGG   Buchnera aphidicola (Aphis glycines): IX46_00175
Entry
IX46_00175        CDS       T04764                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
baph  Buchnera aphidicola (Aphis glycines)
Pathway
baph03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:baph00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    IX46_00175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:baph03021]
    IX46_00175
   03400 DNA repair and recombination proteins [BR:baph03400]
    IX46_00175
Enzymes [BR:baph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     IX46_00175
Transcription machinery [BR:baph03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     IX46_00175
DNA repair and recombination proteins [BR:baph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      IX46_00175
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: ALD15005
UniProt: A0A0M4H445
LinkDB
Position
complement(35185..39414)
AA seq 1409 aa
MKDLLKFLKAQTKTEDFDAIKISLASPDVIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELSSPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVINAGMTNLEKNQILTEEQYLDALEEFGDEFHAQM
GAEAIQLLLKNINLIKECENLRIELNETNSETKRKKLTKRIKLIESFIQSNNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLEVRSLATTIKAAKKMVEREESVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREKINGKGEGMLLNSSHEAEKVYHLG
IAELHSLIKIRIVEYQKNEDNQLIPIKKIVNTTVGRAILWMIVPKGLPFKIVNQTLGKKD
ISQMLNTCYRILGLKPTVTFADQIMYTGFAYAARSGASVGINDMVIPEKKSSIIQEAEIE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVATAMMENLSVELVLNKIGTLKKQTSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTKKDCGTHEGILMTPLIEGGDVKEPLRERVL
GRVTVDNITYPNSEKILIERNTLLNEQWCDVLEQNSIDTIKVRSVVNCDTDFGVCAYCYG
RDLARGNLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAATESSIQIKNKGIINL
NNAKSVTNSSGKIVITSRNVELNIIDKFGRTKESYKIPYGSIMAKKNGETVSSGETIAKW
DPHTIPVITEVNGYVRFVDMIDGQSIIRQADELTGLSSIVVLDTAERVATSKDLRPSLKI
IDEKGNDVLISGTEMPAQYFLPGKAIVQLNDGVKISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKELAILAEISGIISFGKETKGKRRLIITPVDGNNSYEEMIPKWRQLNVFE
GERVERGDVISDGPESPHDILRLRGVQAVTKYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKATIIKSGQSEFLDGEQVEFSRIKISNRILGKKNKILASFSRDLLGITKASLATESFI
SAASFQETTRVLTESAVAGKKDELRGLKENVIVGRLIPAGTGYAYHKERLNRRKNINNNY
ISHNNNSPSQVSAEEASASLSELLNSTLT
NT seq 4230 nt   +upstreamnt  +downstreamnt
gtgaaagatttactaaaatttttaaaagcccaaactaaaactgaagattttgatgctatt
aaaatttcattagcatcaccagatgttattagatcttggtcgtttggcgaagttaaaaaa
ccagaaactattaactaccgaacatttaaaccagaaagagacggattattttgcgctcgt
atttttggtccagtgaaagattatgaatgtttatgtggaaaatataaaagattaaaacat
agaggtgtaatctgtgagaaatgcggcgttgaagttacacagagtaaagtaagacgcgaa
cgaatggggcatatagaactttcttctcctacagctcatatttggtttttaaagtcatta
ccatcacgcataggtttattattagatatgccattaagagatattgaaagagtactatac
tttgaatcttatgttgttattaatgcaggtatgactaatcttgaaaaaaatcaaatattg
acagaagaacaatatttagatgcattagaagaattcggagatgaatttcatgcacaaatg
ggcgcagaagcgattcaattattgttaaaaaacataaatctaataaaagaatgtgaaaat
ttaagaatagaattaaatgaaacaaattctgaaacaaaacgaaaaaaattaactaaacga
attaaattaatcgaatcatttatacaatccaataataaaccagagtggatgattcttact
gtactaccagtactccctcctgatttaagaccattagtaccattagatggtggtagattt
gcaacatctgatttgaatgatttatatcgcagagttatcaatagaaacaatcgattaaaa
agattattagatttagctgctcctgatattatcgtacgaaatgaaaaaagaatgttgcaa
gaagctgtagatgctcttttagataatggaagaagaggtagagcaattacgggatctaac
aaaagacctctcaaatctttagctgatatgatcaaaggtaaacaaggaagatttcgtcaa
aatttacttggaaaacgtgtagactattcaggtcgatctgtgattactgtcggtccttat
ttaagattacatcaatgcggattgcctaaaaaaatggctttagaactttttaaaccattt
atatacggaaaattagaagtacgaagtctggcaactactattaaagctgcaaaaaaaatg
gtagaaagagaagaatctgttgtgtgggatattttagatgaagttattcgagaacatcca
gtattattaaatcgagctcccactttacatagattaggtattcaagcatttgaacctgtt
ttaatagaaggcaaggctatacaattacatccattagtttgtgctgcttataacgcagac
tttgatggcgatcaaatggctgttcatgttccattaactctagaagcacaattagaagct
agagcattaatgatgtctacaaataatattttatccccagcaaatggagaaccaattatt
gtaccttctcaggatgtagttttaggattgtattatatgactcgagaaaaaatcaatgga
aaaggagaaggtatgcttttaaatagttctcatgaagcggaaaaagtatatcatttggga
atcgccgagctacattctttaattaaaattagaatagtagaatatcagaaaaatgaagat
aatcaattaattcctattaagaaaatagtcaatactactgtaggaagagcaattttatgg
atgattgttcctaaaggtttaccatttaaaatagtcaatcaaactctagggaaaaaagat
atttcacaaatgttaaatacatgttaccgtattttgggtttaaaacctactgttactttt
gccgatcaaattatgtatacaggttttgcttatgcagcaagatcaggagcttctgttggt
attaatgatatggtgataccagaaaaaaaatcaagtatcattcaagaagcagaaattgaa
gtggctgaaatacaagaacaatttcaatcaggtttagtaacagcaggtgagagatataat
aaagttatcgatatttgggctgcggcaaatgaaagagtagcaacagcaatgatggaaaat
ttatctgtagaattagttttaaataaaataggaacattaaaaaaacaaacttcttttaat
agcatatttatgatggcagattcaggagcacgaggatctgcagcgcaaattcgtcaatta
gctgggatgcggggattaatggccaagcctgatggttcgattatcgaaactccaattaca
gctaattttagagaaggtttaaatgtattacaatattttatttcgactcatggagctcga
aaaggattagccgatacggcattaaaaactgctaattctggttatttaactcgtagactt
gtagatgtcgcacaagatttagttgttactaaaaaagactgcggaacacatgagggtatt
ttaatgactccattaatcgaaggaggagatgtcaaagagcctttacgtgaacgagtctta
ggtcgagttactgtagacaacatcacatatcctaatagtgaaaaaatattaattgaaaga
aacactttattaaatgaacaatggtgtgatgtattagaacaaaattctatagataccatt
aaagtgagatcagtagttaattgtgatactgactttggtgtttgtgcgtattgttacggt
cgggatttagctagaggaaatctagttaacaaaggagaagctataggagtaattgcagct
caatctataggagaacctggtactcaattaaccatgagaacgtttcatattggtggggct
gcttcaagagctgcaactgaatctagcattcaaattaaaaacaaaggcattatcaatctt
aataatgcaaaatctgtcactaattcttcaggtaagatagttataacatcaagaaatgta
gaattaaatattattgataaatttggaagaaccaaagaaagctataaaataccttacgga
tctataatggcaaaaaaaaatggagaaacagtaagctctggtgaaactatagcaaaatgg
gatccacatactataccagttattacagaagtaaatggatatgtccgatttgtagatatg
attgatggtcaaagtattataaggcaagctgacgaactaactggattatcttcaatagtg
gtattagataccgccgaaagagtagctactagcaaagatttaagaccctcattaaaaatt
atcgatgaaaaaggaaacgatgtacttatctcaggaacagaaatgccagctcaatatttt
ctacctggaaaagcaattgtacaattaaatgatggcgtaaaaattagttcaggtgatact
ttagcaagagtacctcaggaatcaggaggcactaaagatataactggaggattaccaaga
gtagcagatttatttgaagcaagacgcccaaaagaattagctattttagctgaaattagt
ggtattatttcattcggaaaagaaaccaaaggaaaaagaagattaattattactccggta
gatggaaataattcatatgaagaaatgattccgaaatggaggcagttgaatgtatttgaa
ggtgagcgagtagaacgaggagatgttatatctgacggtccagaatcaccacatgatatt
cttcgattaagaggcgttcaagctgtaactaaatatattgttaatgaagtacaagaagta
tatcgtttacaaggtgtaaaaattaatgataaacatattgaagttatagtcagacaaatg
cttagaaaagccacgattattaaatcaggacagtcagagtttttagacggagaacaagtt
gaattttcaagaatcaaaatttcaaatcgcatattaggtaaaaaaaataaaattttagcg
agcttttcaagagatttactaggaattactaaagcatcattagcaactgaatcatttata
tcagctgcatcgtttcaagaaacaactagagtattaacagaatctgcagtggcaggaaaa
aaagatgaactaagaggattaaaagaaaacgttattgttgggcgcttaattccagcaggt
actggatatgcatatcataaagaaagattaaatcgtcgaaaaaatataaataataattat
atatcacataataataattcaccttcacaagtaagcgctgaagaagcatctgccagttta
tctgaattattaaattctactctaacataa

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