Entry |
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Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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KO |
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Organism |
baph Buchnera aphidicola (Aphis glycines)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:baph00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IX46_00175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:baph03021]
IX46_00175
03400 DNA repair and recombination proteins [BR:baph03400]
IX46_00175
Enzymes [BR:baph01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IX46_00175
Transcription machinery [BR:baph03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IX46_00175
DNA repair and recombination proteins [BR:baph03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IX46_00175
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(35185..39414)
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AA seq |
1409 aa
MKDLLKFLKAQTKTEDFDAIKISLASPDVIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELSSPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVINAGMTNLEKNQILTEEQYLDALEEFGDEFHAQM
GAEAIQLLLKNINLIKECENLRIELNETNSETKRKKLTKRIKLIESFIQSNNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLEVRSLATTIKAAKKMVEREESVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREKINGKGEGMLLNSSHEAEKVYHLG
IAELHSLIKIRIVEYQKNEDNQLIPIKKIVNTTVGRAILWMIVPKGLPFKIVNQTLGKKD
ISQMLNTCYRILGLKPTVTFADQIMYTGFAYAARSGASVGINDMVIPEKKSSIIQEAEIE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVATAMMENLSVELVLNKIGTLKKQTSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTKKDCGTHEGILMTPLIEGGDVKEPLRERVL
GRVTVDNITYPNSEKILIERNTLLNEQWCDVLEQNSIDTIKVRSVVNCDTDFGVCAYCYG
RDLARGNLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAATESSIQIKNKGIINL
NNAKSVTNSSGKIVITSRNVELNIIDKFGRTKESYKIPYGSIMAKKNGETVSSGETIAKW
DPHTIPVITEVNGYVRFVDMIDGQSIIRQADELTGLSSIVVLDTAERVATSKDLRPSLKI
IDEKGNDVLISGTEMPAQYFLPGKAIVQLNDGVKISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKELAILAEISGIISFGKETKGKRRLIITPVDGNNSYEEMIPKWRQLNVFE
GERVERGDVISDGPESPHDILRLRGVQAVTKYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKATIIKSGQSEFLDGEQVEFSRIKISNRILGKKNKILASFSRDLLGITKASLATESFI
SAASFQETTRVLTESAVAGKKDELRGLKENVIVGRLIPAGTGYAYHKERLNRRKNINNNY
ISHNNNSPSQVSAEEASASLSELLNSTLT |
NT seq |
4230 nt +upstreamnt +downstreamnt
gtgaaagatttactaaaatttttaaaagcccaaactaaaactgaagattttgatgctatt
aaaatttcattagcatcaccagatgttattagatcttggtcgtttggcgaagttaaaaaa
ccagaaactattaactaccgaacatttaaaccagaaagagacggattattttgcgctcgt
atttttggtccagtgaaagattatgaatgtttatgtggaaaatataaaagattaaaacat
agaggtgtaatctgtgagaaatgcggcgttgaagttacacagagtaaagtaagacgcgaa
cgaatggggcatatagaactttcttctcctacagctcatatttggtttttaaagtcatta
ccatcacgcataggtttattattagatatgccattaagagatattgaaagagtactatac
tttgaatcttatgttgttattaatgcaggtatgactaatcttgaaaaaaatcaaatattg
acagaagaacaatatttagatgcattagaagaattcggagatgaatttcatgcacaaatg
ggcgcagaagcgattcaattattgttaaaaaacataaatctaataaaagaatgtgaaaat
ttaagaatagaattaaatgaaacaaattctgaaacaaaacgaaaaaaattaactaaacga
attaaattaatcgaatcatttatacaatccaataataaaccagagtggatgattcttact
gtactaccagtactccctcctgatttaagaccattagtaccattagatggtggtagattt
gcaacatctgatttgaatgatttatatcgcagagttatcaatagaaacaatcgattaaaa
agattattagatttagctgctcctgatattatcgtacgaaatgaaaaaagaatgttgcaa
gaagctgtagatgctcttttagataatggaagaagaggtagagcaattacgggatctaac
aaaagacctctcaaatctttagctgatatgatcaaaggtaaacaaggaagatttcgtcaa
aatttacttggaaaacgtgtagactattcaggtcgatctgtgattactgtcggtccttat
ttaagattacatcaatgcggattgcctaaaaaaatggctttagaactttttaaaccattt
atatacggaaaattagaagtacgaagtctggcaactactattaaagctgcaaaaaaaatg
gtagaaagagaagaatctgttgtgtgggatattttagatgaagttattcgagaacatcca
gtattattaaatcgagctcccactttacatagattaggtattcaagcatttgaacctgtt
ttaatagaaggcaaggctatacaattacatccattagtttgtgctgcttataacgcagac
tttgatggcgatcaaatggctgttcatgttccattaactctagaagcacaattagaagct
agagcattaatgatgtctacaaataatattttatccccagcaaatggagaaccaattatt
gtaccttctcaggatgtagttttaggattgtattatatgactcgagaaaaaatcaatgga
aaaggagaaggtatgcttttaaatagttctcatgaagcggaaaaagtatatcatttggga
atcgccgagctacattctttaattaaaattagaatagtagaatatcagaaaaatgaagat
aatcaattaattcctattaagaaaatagtcaatactactgtaggaagagcaattttatgg
atgattgttcctaaaggtttaccatttaaaatagtcaatcaaactctagggaaaaaagat
atttcacaaatgttaaatacatgttaccgtattttgggtttaaaacctactgttactttt
gccgatcaaattatgtatacaggttttgcttatgcagcaagatcaggagcttctgttggt
attaatgatatggtgataccagaaaaaaaatcaagtatcattcaagaagcagaaattgaa
gtggctgaaatacaagaacaatttcaatcaggtttagtaacagcaggtgagagatataat
aaagttatcgatatttgggctgcggcaaatgaaagagtagcaacagcaatgatggaaaat
ttatctgtagaattagttttaaataaaataggaacattaaaaaaacaaacttcttttaat
agcatatttatgatggcagattcaggagcacgaggatctgcagcgcaaattcgtcaatta
gctgggatgcggggattaatggccaagcctgatggttcgattatcgaaactccaattaca
gctaattttagagaaggtttaaatgtattacaatattttatttcgactcatggagctcga
aaaggattagccgatacggcattaaaaactgctaattctggttatttaactcgtagactt
gtagatgtcgcacaagatttagttgttactaaaaaagactgcggaacacatgagggtatt
ttaatgactccattaatcgaaggaggagatgtcaaagagcctttacgtgaacgagtctta
ggtcgagttactgtagacaacatcacatatcctaatagtgaaaaaatattaattgaaaga
aacactttattaaatgaacaatggtgtgatgtattagaacaaaattctatagataccatt
aaagtgagatcagtagttaattgtgatactgactttggtgtttgtgcgtattgttacggt
cgggatttagctagaggaaatctagttaacaaaggagaagctataggagtaattgcagct
caatctataggagaacctggtactcaattaaccatgagaacgtttcatattggtggggct
gcttcaagagctgcaactgaatctagcattcaaattaaaaacaaaggcattatcaatctt
aataatgcaaaatctgtcactaattcttcaggtaagatagttataacatcaagaaatgta
gaattaaatattattgataaatttggaagaaccaaagaaagctataaaataccttacgga
tctataatggcaaaaaaaaatggagaaacagtaagctctggtgaaactatagcaaaatgg
gatccacatactataccagttattacagaagtaaatggatatgtccgatttgtagatatg
attgatggtcaaagtattataaggcaagctgacgaactaactggattatcttcaatagtg
gtattagataccgccgaaagagtagctactagcaaagatttaagaccctcattaaaaatt
atcgatgaaaaaggaaacgatgtacttatctcaggaacagaaatgccagctcaatatttt
ctacctggaaaagcaattgtacaattaaatgatggcgtaaaaattagttcaggtgatact
ttagcaagagtacctcaggaatcaggaggcactaaagatataactggaggattaccaaga
gtagcagatttatttgaagcaagacgcccaaaagaattagctattttagctgaaattagt
ggtattatttcattcggaaaagaaaccaaaggaaaaagaagattaattattactccggta
gatggaaataattcatatgaagaaatgattccgaaatggaggcagttgaatgtatttgaa
ggtgagcgagtagaacgaggagatgttatatctgacggtccagaatcaccacatgatatt
cttcgattaagaggcgttcaagctgtaactaaatatattgttaatgaagtacaagaagta
tatcgtttacaaggtgtaaaaattaatgataaacatattgaagttatagtcagacaaatg
cttagaaaagccacgattattaaatcaggacagtcagagtttttagacggagaacaagtt
gaattttcaagaatcaaaatttcaaatcgcatattaggtaaaaaaaataaaattttagcg
agcttttcaagagatttactaggaattactaaagcatcattagcaactgaatcatttata
tcagctgcatcgtttcaagaaacaactagagtattaacagaatctgcagtggcaggaaaa
aaagatgaactaagaggattaaaagaaaacgttattgttgggcgcttaattccagcaggt
actggatatgcatatcataaagaaagattaaatcgtcgaaaaaatataaataataattat
atatcacataataataattcaccttcacaagtaagcgctgaagaagcatctgccagttta
tctgaattattaaattctactctaacataa |