Buchnera aphidicola (Aphis glycines): IX46_01920
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Entry
IX46_01920 CDS
T04764
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
baph
Buchnera aphidicola (Aphis glycines)
Pathway
baph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IX46_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baph03019
]
IX46_01920
03016 Transfer RNA biogenesis [BR:
baph03016
]
IX46_01920
Enzymes [BR:
baph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IX46_01920
Messenger RNA biogenesis [BR:
baph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IX46_01920
Transfer RNA biogenesis [BR:
baph03016
]
Prokaryotic type
tRNA degradation factors
IX46_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
S1_2
KH_SLS1_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
ALD15313
UniProt:
A0A0M4H3N1
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All DBs
Position
complement(404064..406187)
Genome browser
AA seq
707 aa
AA seq
DB search
MLSPIVRKFQYGQHIITLETGIMARQATSAIMASMDDTAVFVTVVGDKTVHPGQKFFPLT
VNYQERTYAVGRIPGGFFRREGRPSENEILTARLIDRPIRPLFPKGFFNEIQIIATVVSV
NPQINPDIISIIGASAALSLSGIPFYGPVGAARVGLIDNQYILNPTTDDMKSSSLDLVVS
GTQNAVLMVEAESKILSEEKVLGAIIFGHQQQQVVINNIRSLSNEARKLPWIISYPEINT
TLESKLITLVEKDISNAYLIFNKQERHEKLNFLKDNIVKSLFNENLNVDVSEIDEIFQKI
EKNIVRKRILNNEYRIDGREKDMIRALDVRTGVLPRTHGSALFTRGETQSLVSVTLGTSR
DAQNLDELLGDKTDNFLFHYNFPPYSVGEIGIVGSPKRREIGHGRLAKRSLLAVMPKIDA
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGISMGLVKEGDNYVLLSD
ILGDEDHLGDMDFKVSGTKEGITALQMDIKIEGITNEIMHIALSKAKSARLHILNVMKQA
LGQPRKEISEFAPRIHTIKINPEKIKDVIGKGGSVIRMLTEETGTIIEIEDDGTVKISAA
IGEKAKNAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFIAIGFGKEGLVHISQISDKRVE
KVSDHLKLDQIIPVKVLEIDRQGRLRLSIKEVKDSIISNKSINNIFI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgctgagtccaattgtacgaaaattccaatatggtcaacatataattacattagaaacc
gggataatggcccgacaagcaacatctgctattatggcaagtatggatgatactgctgtt
tttgttactgtcgttggagataaaacagtgcatcctggtcaaaaatttttccctcttaca
gttaattatcaagaaagaacatatgctgttggtaggatacctggaggtttttttagaaga
gaaggtcgtcctagtgaaaatgaaatactaactgctcggttaattgataggccaattcga
cctttatttccaaaaggattttttaatgaaatccaaattattgccacagtagtatcagtt
aacccacaaatcaatcctgatatcatttctattattggcgcttcagcagcactcagttta
tctgggattccattttatggtccagttggagccgccagagtaggtttaattgataatcag
tatatattaaatcctacaactgacgacatgaaatctagttctttagatctagttgtatca
ggaactcaaaatgctgttttaatggtagaagcggaatcaaaaatattgagtgaagaaaaa
gtacttggagcaattatttttggtcatcaacaacaacaagttgttattaataatattcga
tctttatcgaacgaagctagaaaattaccttggattatatcttatcctgaaattaatact
acattagagtctaaacttataacattggttgaaaaagatataagtaatgcttatttaata
ttcaataaacaagaaagacatgaaaaattaaattttcttaaagataatatagtaaaatca
ctttttaatgaaaacttaaatgtagatgtaagtgaaattgatgaaatttttcaaaagatt
gaaaaaaatattgtaagaaaacgtatattaaataatgaatatcgtattgatggaagagaa
aaggatatgattcgagcattagatgtgaggacaggtgttttacctcgtacacatggttct
gctttatttactcgcggtgaaacacaatccttagtttctgttactttaggaacatctcgg
gatgcgcaaaatttagatgaattattaggtgataaaacagataattttttatttcattat
aattttccaccttattctgtaggagagataggtatagtaggatcgcctaaaagaagagaa
attggacatggtcgattagctaaaagaagtttattagcggtaatgccgaaaattgatgca
tttccatatacgattagagttgtatctgaaataactgaatcaaatggttcgtcttctatg
gcttctgtttgtggagcgtcattagctttaatggatgctggagttccaataaaatctgct
gtagctggaatatctatgggcttagtaaaagaaggtgacaattatgtattactttcagat
attttaggtgatgaagatcatttaggagatatggatttcaaagtttctggtactaaagaa
ggtattacagctttacaaatggatataaaaatagaaggtataactaatgagattatgcat
attgctttaagtaaagctaaatctgctagattacatattttaaatgttatgaaacaagca
ttaggtcagcctagaaaagaaatttctgaatttgcaccaagaattcatacaattaaaatt
aatcctgaaaaaattaaagatgtaataggaaaagggggttctgtcattagaatgttaaca
gaagaaacaggaactataattgaaattgaagatgatggaacagtaaaaatatccgccgca
atcggagagaaagcaaaaaatgcaattcgtagaattgaagaaattaccgctgaaattgaa
gttggtcgtatttattcaggaaaagtcactcgtattgttgattttggtgctttcattgca
ataggttttggaaaggaagggttggtgcatatttctcaaatttctgataaaagagtagaa
aaagtgtcggatcatttgaaattagatcaaattatacctgtaaaggtattggaaattgat
agacaaggacgtttaaggttaagtattaaagaagtaaaagattctattatatctaataaa
tctataaataatatttttatctga
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